KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_89729
Entry
VOLCADRAFT_89729  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_89729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_89729
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      VOLCADRAFT_89729
SSDB
Motif
Pfam: BHD_3 BHD_1 Rad4 BHD_2
Other DBs
NCBI-GeneID: 9618638
NCBI-ProteinID: XP_002949353
JGI: 89729
UniProt: D8TSH3
LinkDB
Position
Unknown
AA seq 1176 aa
MAYGSSGDYEWEEVEEEDWEVICVDDEEQKTGVPRTGIEFTLEADEPQRRTKRTITKRER
EAAAAVHRSHVLCLLARALLLDWAAAQPEVQATALSLLPPGSALRNQSSEEPQRAINGML
PLVTWFRSTFAVLPPDLVGPRTGQGTGRRWRPEDELDEQLLRTARAAAGTVECLVALFAA
LVRAQGGSARVVRLLDVVPLAPWRARPKTVRTVVATAGVPPPPPSGTGGGGGGGGGSRRA
LDLEAGDELPPPPPPPPPPPVSRPGQGNAAAAAGGASGGAKGRKGRRLEDVLADRGYGGG
RGKKRRVEGEAGEGGAGGGGGGGVSRSKSTQVAVGRGPAEGTAKARGGKRQKEESKGGGG
GSVPAAEGVCCPGQDAATAAGDDGCRSRPSNKGDEEFELQLQMALLATGREAEVRRRKGQ
EGGPAADGNGNGGGAVRSQSRGGAEAGGGGGGGGDGPGGKAVVANGSGSGSGAPAGTAMS
VRPEVVVSCWAEVYCGSADKGRWIPVDVVNGYVDRPELIDTATQRPTPVCYVVAAELGAL
VDVTPRYCHNLLAAKRNRDEAWWTATADIVQRQPGSAGGGNRGCVGGGGGGGGVGDLRAA
REAAELHQRGLSQLQGLPTSIEGFKSHPLYVLKRHIGKYESLRPGTAPLGLHRGEPYYPR
NQLSVLHTVERWRREGRQVAAQVRDSELRSPAKVVKKRLMGGTAAAAVAAGPTGAARRTA
STRAGGKGLNGGNDEGEEDGDEDVLMLEAAGEGSAAAGAADGGGPTINLYGRWQTDPWVP
PVAEGGIVPKNERGNVECPPLVPELPRGTVHITLGPGLGALCRTLGLDFAPGLVGFEVQG
GRMVPRLDGVVVCEEVSELVVAAYLERETARAAAAAAKLRRVAVAAWRRLLGALRVRLQL
ERDYGDGDGAGAFGAGAGATTGAAQIQIQQQQQQQQLLSGAAAAGGWELEEALGPDTRAD
VEAVCEGEGEGYSGAAAAAGPGRIPGRWGHNPVLFMGAGQLAPPALAAEAVSSRGGADGG
DVDFLRGGSGTSSKLSDLTSWLTDKLRPPEPEPVRVGSMEGTNNRSNIVQGVKDAASAAA
NRAADAASKAAEAANRAAERSGLTASPSRPIDVPTNSELLSAVAKPSPAPGKGPVEEAAR
AEARSESSEPALRAEAVAAGRPEPAVEGGKANCSAP
NT seq 3531 nt   +upstreamnt  +downstreamnt
atggcctatggaagttcaggcgattacgaatgggaagaagtcgaggaggaggactgggaa
gtcatttgtgtggatgacgaggagcaaaagacgggagtgccgaggactggcattgaattc
acattggaagcggatgagccccagcgccgcaccaagcgcaccatcaccaagcgggagcgc
gaggcggccgctgccgtacaccgcagtcacgtgctgtgcctcctagcccgggccctcctc
ctggactgggcagcggctcagccggaagtgcaggccacggcactgtcgctgctgcccccc
ggctcggcgctccggaaccagtcctcggaggagccccagcgggccatcaacggcatgttg
cccctggtcacctggttccggagcacatttgcagtactgccaccggacctggtagggccc
cgtacgggacaaggaacagggcgccgctggaggccagaggacgagctggacgagcagttg
ctccgtacagctcgcgccgcggcgggcactgtggagtgtctggtggccctgttcgcggcg
ctggtgcgggcccaggggggcagcgcgagagttgtacgactgctggacgtcgtgccgctg
gcgccgtggagggcgcggccgaagacggtacgaacagtggtcgcaacggcaggtgtgccg
ccgccgccgccatctggcactggcggtggcggtggcggtggcggtgggtcccgtcgtgct
ttggatctggaggcgggggatgagctgccgccgccgccgccgccaccgccaccgccgccg
gtatcacggccgggtcagggcaatgctgctgccgccgccgggggtgcaagtggcggcgct
aagggccggaagggccgtcggctggaggacgtgctggcggataggggttatgggggcggg
aggggcaagaagcggagggtggagggggaagcaggagaaggaggcgcaggtgggggtggt
ggtgggggggtgagcaggagtaaatccacgcaggtggctgtggggagggggccggcggag
gggaccgcgaaggcgagggggggaaagcggcagaaagaggaaagcaagggcggcggcggc
ggcagtgtgcctgcggcggagggagtatgctgtccgggacaagatgcggcgacagcggcg
ggagatgacggctgcagatcccggcccagcaataagggtgacgaggagttcgagctgcag
ctgcaaatggccctgctagccacaggcagagaggcggaggtgaggaggcggaagggacag
gaggggggacctgcggcggacggcaatggcaacggcgggggcgctgtgcgatctcaatcc
cgcggaggagcagaagcaggaggaggaggaggaggaggaggtgatggacccggtggcaag
gcggtggtggcaaatggatctggatctggatctggcgcgccagctggcaccgccatgagt
gtacgaccggaggttgttgtcagttgttgggctgaggtgtactgcggcagtgccgacaaa
ggacgttggatcccggtggatgtggtcaacggctacgtggacagaccggagcttatcgac
accgccactcagcgccccaccccggtatgctacgtggtggcggccgagctgggagccctg
gtggacgtcaccccccgctactgccacaacctgctggcggcgaaacggaaccgggatgaa
gcctggtggaccgctactgccgatatcgtacagcggcagccggggagcgcgggcggtggc
aaccgcggctgtgttggtggcggcggcggcggcggcggtgttggggacctgcgtgcggct
cgcgaggcggcggagctgcaccagcgggggctgagtcagctccagggactgcccacgtcc
attgaggggttcaagagccaccccttgtacgtactgaaacgacatattgggaagtacgag
tccctccgccccggtacggcacccctggggctacaccggggggagccgtactacccgcgt
aaccagctgagtgtactgcacaccgtggagaggtggcggagggagggccggcaggtggca
gcccaggtacgggactccgagttgcgcagcccggccaaggtcgtcaaaaagcgactgatg
gggggaacagcggcggcggcggtggcggcagggccgacgggagctgcacgtcgtacggca
tctacgcgcgccggcggcaagggactcaacggaggcaatgacgagggggaggaggatggg
gatgaggacgtgttgatgttggaggcggccggagagggctcagcggccgccggtgccgca
gacggtggcggcccaaccattaacttgtacggcaggtggcaaaccgacccgtgggtcccg
cctgtcgccgaaggcggcatcgtacccaagaacgaacgtggcaatgtggagtgcccgccc
ctggttccggagctgccacgtggcaccgtacacatcacccttggacccgggctaggcgca
ttatgccgtacattgggattagattttgcgccgggactggtggggtttgaggtccagggg
gggcgcatggtgccaagattggacggcgtggtggtgtgtgaggaggtttcggagctcgtc
gtggcggcgtacttggagcgggaaacggcgagggcggcggcggcggcggcgaagctgcgg
cgtgtggcggtggcggcgtggcggcggttgctcggggctctgagggtgcgattgcagttg
gagcgggattatggtgacggggacggtgccggtgcttttggagcaggtgccggggcgacg
accggagcagctcagatccagatccagcagcagcagcagcagcagcagctgctttccggt
gcggctgctgcgggcgggtgggagctggaggaggccttgggtcctgatacgcgtgcggat
gtggaggctgtgtgtgagggggagggggaggggtatagtggtgccgctgctgctgcgggg
ccgggtcgtatacctggtcggtggggccacaaccccgttctcttcatgggagctggccag
ctggctccccccgccctagcagctgaagcggtgtcgagccgtggtggtgctgatggtggt
gacgtggacttcctccgtggcggttccggcacctcctccaagctgtcggacctgacctcc
tggctcacggataagctgcggcctccggagccggagcccgtacgagtgggcagtatggag
ggcaccaacaaccggagcaacatcgtgcagggagtcaaggatgcggcctctgccgccgcc
aacagggcagctgatgctgccagcaaggcggcggaagccgctaatcgcgcagcggaacgt
agcggcctaacggcctcccccagccgccctatcgacgtccccaccaactccgagctgcta
tccgccgtagctaagcccagcccagccccaggcaagggccctgtggaggaggcggcgcgg
gctgaggcccggtccgagtcttcggagccggcgctgcgggccgaggctgtggcggcgggt
cggcctgagccagcggtggaaggaggcaaggccaactgtagcgccccctag

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