Volvox carteri f. nagariensis: VOLCADRAFT_90359
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Entry
VOLCADRAFT_90359 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcn03021
]
VOLCADRAFT_90359
Transcription machinery [BR:
vcn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
VOLCADRAFT_90359
TFIIIC, fungi type
VOLCADRAFT_90359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_12
TPR_6
ANAPC3
TPR_17
TPR_15
TPR_9
BTAD
Motif
Other DBs
NCBI-GeneID:
9619228
NCBI-ProteinID:
XP_002949983
JGI:
90359
UniProt:
D8TU59
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MAAAASDSEGVEIEDGTPRVTPAVGGAATAGRPTRSAASRGSSKLRGNSSALASFFSSED
EESESATDGDDDDEEDGDTEYTQTRGSDDDDDDDSEYDSDLNGGAGAGRGSTRGRGSRGG
AVISRHRSRSPPGGISDGGYTSGFTTGDESGEDLFDGDLDPMSLLEELEQQGAAPVGTAG
GGGTGAYGGGTSASALQPFELIRQRRWAQRKHGGLRRGGDSDDVDDGDDGTAAAMEREET
GPEGDDVEMEDAGPSRGGGRGRGRGGRGRGRGRGGRTPSAAASGGRGRGRPAQERRRSSA
ASDVFGADVDDILDDPLAERMGIIEPGSRRRGRGRGRGRGRSRARRRSRPKRGLPEEVVA
KLGQANVMYALQDYQPAIELLTQVIKEYPNVSDPYHTLGLLHEANGQPRKALDFFMIAAH
LSPKDVALWKRLASMSTELGFYRQAVYCLSKAINRNRSDLDAIWDRAVLYAQVKKNLNPQ
QMVFAASGRRNGQGLGAIFRGNCLKLFRASPLELRGKNVYGKRAEWNAGVICRKMSYYSL
ETVHARTFVEVHELAVGRQRPGDPEVPVMKARLYHQAGAPLKAIAVLEAHLRDYPSHVDL
THINILAELYMERGGYVEARALIQRAVPVLCPDQALPLDLAVKSGLCLAHTGQWEEADEV
LGELLREPVEQFGDLYISVGSALAGLGQYDKALHYLNPLLEHPDFNDLGLWTQLLKCHTA
LGEVGEGLELYREQMQAMEQSDPRRPRGGSGNEAQPAVPPNEPSGQVGCTEVRYVSLIQP
AVESSLSALAADLARVNDPSLEPSLKRAILRRRMFARKGKRKGEGAAETGSVFKGATRRD
RRSARTREYDRKAAEVLGLPYDDIDADDVGGTGGGSGLDGSGTDGTDGGGGATGSDSDFS
GGEGRRRRGHGGGGGAPRFPRGGLVGPSVLSDPAQAQVLLQVTRALTAMGRSEDARALLD
RAIALVISGGGGAAAAAAADGGGSGSIGIGSLMVKRAGGPWFERAVIDRLKLGQLELAST
ATEAGADAAAGGGGGGSGGGWGLLDSSQLAALKSLTNRWPYSIGLWNLYCSAHAQGHVYL
LARQFREAASEYFHAYRFVPEEPLLLLCLGVTLLSEAMASAAAMAPGAARGGGGGGGGAA
SQQLPAHRHGRSGGGGGGSGALRDRNRGVLAGFAFLQMYQKTRGGQLSQEVSYNMGRAAH
QLGLLHLAHHYYELALAAPPAAAKAGWQSTLGGGGAAAAAAAAGFGSGAAATATHGSGER
WDLRRDVAHNLVQLYLSSGATELAREVMAKYLVF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcttcggattccgagggtgtcgagatagaggacggaacccctcgggtc
accccagctgtcggcggcgctgctactgccggccgccccactcgcagcgccgcctcgcgt
ggcagtagcaaactccgcggcaatagcagcgcactggccagctttttcagctctgaagat
gaggaatcggaatccgctactgacggcgacgacgacgatgaggaagacggcgacacggag
tatacacagacccgcgggtcagatgacgacgatgacgacgattcagagtacgacagcgac
ctaaatggcggcgccggcgccggaaggggctcaactcggggccgaggcagccggggcgga
gctgtcatcagccgccatcgaagtcggagcccccctgggggcatcagcgatggcggttac
acttcgggttttacgacgggtgacgaaagcggggaggatctatttgacggggatctggat
cccatgtcgctattagaggagctggagcagcaaggcgcggcgcctgtaggtacggcaggc
ggcggcggtacgggcgcctacggcggcggcacctctgcaagcgcgctacagcccttcgag
ctcattaggcaacgccgctgggcacaacggaagcatgggggcctccgccgcggcggcgac
tctgatgacgttgatgacggcgatgacggtacggcagcggcgatggagagagaggagacg
gggcctgagggcgacgatgtggagatggaggacgcggggcccagtcgtggcggcggccga
ggccgaggccgaggaggtaggggccggggccggggccggggcggcaggacgccgtcagca
gccgccagcggcggccgcggccgtggccgccctgcgcaagagcgccgcaggtcttccgcg
gcctcggacgtgttcggcgctgacgtggatgacattttggacgatccgttagcggaacgg
atgggaattattgaaccagggtcgcgacgacgtggccgcgggcggggtcgtgggcgaggc
cggagtcgggctcgccggaggagtcggccgaagcgtgggcttccagaagaggtggtggcc
aaattagggcaggccaacgtcatgtacgcgctccaggactaccagcccgctatcgagcta
ctcacacaggtaatcaaggagtacccgaacgtgtccgacccataccacaccctaggcctg
ctccacgaagccaacggccaaccacgtaaggccctggatttcttcatgattgcggctcac
ctgagccccaaagatgtggcgctgtggaagcgactcgcgtcaatgtctacggaactaggg
ttttacaggcaagcggtatactgcctgtctaaggccataaaccgaaatcgttcggatctg
gacgcgatatgggatcgggcggtgttgtatgctcaggtgaaaaaaaatttaaatcctcaa
caaatggtctttgccgcaagcggtcggcgaaatggacaaggccttggcgcaattttccga
ggtaattgtttaaagctctttagagcgagccctttagagttacgtggcaaaaatgtttac
ggtaaacgcgcagagtggaatgcgggtgtcatttgtagaaaaatgtcgtactacagtttg
gaaactgtgcatgcacgcacttttgtggaggttcatgagttagcagtcggacgccaacgg
ccaggtgatccggaggttcctgtcatgaaagcacgtctatatcaccaggcgggagcacca
ctcaaggccattgccgtactggaggcgcatcttcgggactatccgagccatgtggacctc
acccacatcaacatccttgcagaactctacatggagcgcggcggttatgtggaggcgcga
gctctcatacagcgggcggtgccggtcttgtgtcctgatcaggcgctgccgctggacttg
gcggttaagagcggcttgtgtttggctcacacgggtcagtgggaggaggcggacgaggtg
ctcggggaactgctgcgggagccagtggagcagttcggcgacctgtacatcagcgtgggc
tccgctctggcagggctggggcaatacgacaaggccttacactacctgaacccgcttctg
gagcaccccgacttcaacgacctggggctgtggacccagctgctcaagtgccacacagca
ctgggggaggtgggggaggggctggagctgtacagggaacagatgcaggccatggagcag
tcggacccgcgacgtcctaggggaggatctggcaatgaggctcagccagctgtacctcca
aatgaaccttctggacaggttggttgcacggaagtgaggtacgtgtccctgatccagccg
gccgtggagtcctcgctgagtgctctggctgctgacctggcgcgagtgaacgaccccagc
ctggagccgtctttgaagcgagccattctccggaggcggatgtttgcccggaagggaaag
agaaagggtgagggcgctgctgagactggttccgtgttcaagggggccacgcgaagggac
cgccgttctgcacgtacacgcgagtacgaccgcaaggccgcggaggtgctgggcctgccg
tacgatgatatcgacgctgacgatgtcggcggcactggcggcggatcgggtttggacggc
tccggtacggacggcacagacggcggcggcggcgccaccggcagcgacagcgacttcagc
ggcggcgagggccggcggcggcgcggccacggcggcggcggcggcgccccgcggttcccc
cggggggggctcgtcgggccgagcgtcctgagcgacccagcacaggcccaagtactgctg
caggtgactcgggcgctgacagcgatggggaggtcggaggatgcaagggcccttctggat
cgcgccatcgctctcgtcatctcaggtggcggcggcgccgctgccgccgccgccgccgac
ggtggcggcagcggcagcatcggcatcggcagtctcatggtcaaacgcgctggcgggccc
tggttcgagcgagccgtcatcgaccgcctcaaacttggtcagctggagctggcgagtacg
gcgacggaggcgggggccgacgcagccgccggcggaggaggaggaggcagcggaggtggt
tggggtcttctagattcgagtcaactggcggcgctgaagagtttgacgaatcgttggccg
tacagcatcggcttatggaacctgtactgctcggcccatgcgcagggccacgtgtacctg
ctggcccggcaatttcgcgaggcggcgtcggagtattttcacgcgtaccgcttcgtacct
gaagagccgttattactgttatgtctgggagtcacgttgctgtcggaagctatggcctcc
gctgcagcgatggcgccgggcgccgccagaggaggcggcggcggcggcggcggcgctgcg
tcccagcagctgccggcgcatcgccacggccgcagcggcggcggcggcggtggcagtggc
gcgctgcgcgaccgcaaccgaggcgtgctcgccgggtttgcattcctgcagatgtaccaa
aagacccggggcgggcagctgagtcaggaggtgtcgtacaacatgggacgagcagcccac
cagctaggccttctgcacctggctcaccactattacgaattggcgttggcggcgccgcca
gctgccgccaaagcagggtggcagtcaacgcttggggggggcggcgccgccgccgccgcc
gcggccgcaggtttcggttccggtgccgcggccacagcgacccatgggtccggcgagcgt
tgggatctccgtcgagatgtggctcataatcttgtccagttgtatctcagcagcggtgcg
acagagctggcgcgggaggtgatggccaagtaccttgtgttctga
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