Volvox carteri f. nagariensis: VOLCADRAFT_90392
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Entry
VOLCADRAFT_90392 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
vcn03015
mRNA surveillance pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_90392
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_90392
03015 mRNA surveillance pathway
VOLCADRAFT_90392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_90392
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_90392
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
VOLCADRAFT_90392
TREX complex
VOLCADRAFT_90392
Spliceosome [BR:
vcn03041
]
Complex C
Other components
EJC/TREX
VOLCADRAFT_90392
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
VOLCADRAFT_90392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
9619321
NCBI-ProteinID:
XP_002949892
JGI:
90392
UniProt:
D8TU90
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MAETKLTMSLDDLIAQAGKKKERRPQQQRPASGQAPKSGPRKGLRRNRQKNAANGNAAPT
QPRPKQQPQQQQPQQQQQPQQQQQPRQTQAQQGGQRIRKSGAPNLGIRGGQVQKRNVIEV
PVKMIRSPQQALPPPRRQALPMRQQAPEGKWQHDMYADDYQPPRRAPVPTAPSTKLIVTN
LHHQVSEDDLLELFSTCGTVKSKAINYDNSGRSLGSGWVVFETRAEAEAAKKEYHGVKLD
GRPMEITFADGAGAGASLTKLSSGISVQKPGGGGAGGGRAGGGGGVGKAAGGNGGQRLAA
AAIRETAAASRGGAERNGRGNRLRSAVVGRAQLDADLQDYMQE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaactaagttgacgatgtccctggatgatctaatagcacaggcagggaaaaag
aaagagaggaggcctcagcaacagcggccggcctccggccaggcaccaaagtctggtccc
cggaaaggactgcggagaaaccggcaaaagaacgccgcgaacggcaacgcggctcctact
cagccacggcccaagcagcaacctcagcagcagcagccacagcaacagcagcaacctcaa
cagcagcagcagccgcgccagacgcaggcccagcaaggcggtcagcgcattcgcaaaagt
ggcgcgccaaacctcggtattcgcggtggacaggtgcagaagcgtaacgttatcgaagtg
ccggtcaagatgatcaggtctccacagcaggctctcccgcctccgcggagacaggcattg
cctatgcggcaacaagctccggagggcaagtggcagcatgacatgtacgctgatgactac
cagcctccgcgacgtgctcccgttcctacagccccgagtaccaagctcatcgttaccaac
cttcatcaccaagtttccgaggacgacttgctggagctgttctcaacgtgcggcaccgtc
aagagcaaagccatcaactacgacaactccgggcgctccctgggctcggggtgggtcgtg
tttgagacccgggcggaggcggaggcggccaagaaggagtaccacggcgtcaagctggat
gggcggcccatggagattaccttcgcggacggagctggtgccggagcctccttgacgaag
ctatcttcgggcatctcggttcagaagcctggcgggggtggagcgggtggcggccgggcc
ggcggtggcggcggtgtgggcaaagccgcgggcggcaacgggggccagcgcctggcggcg
gctgcgatccgggagacggcagcggcttcgcggggcggggccgagcgaaatggccgcggc
aacagactccgtagcgccgtggtaggccgagcgcaactggatgcggacctgcaggactac
atgcaggagtga
DBGET
integrated database retrieval system