Volvox carteri f. nagariensis: VOLCADRAFT_90726
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Entry
VOLCADRAFT_90726 CDS
T01330
Name
(RefSeq) pathogenesis-related genes transcriptional activator
KO
K09285
AP2-like factor, ANT lineage
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_90726
Transcription factors [BR:
vcn03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
VOLCADRAFT_90726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP2
Motif
Other DBs
NCBI-GeneID:
9619740
NCBI-ProteinID:
XP_002950394
JGI:
90726
UniProt:
D8TVK2
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MIQMLRLQLCSLKARLSERGPPPAARLAAAVATMQTCIRSRLHNFASELGRIRRLLAMFC
TVADQYADGQHVHDGLLGDSGGELDELQCWQQDLGGPWPSSDCSDGGDDSASEPAPLSAC
PSAPSPAVVEHQQHQNQQHQNQQQYHHSLMQAAQQPAPLPQQITPLPQHGVCARGSGTSD
QSGMHHAYDGIVTDSGSGVHEHQRQQEALVGGRWRQYEQLQQPQPELLRADKIFSNGGWL
TLPWQPLVQPLQPQPLPSVFVPSTQFTLPFCTGSRAVTSSTQQFVQQQPGVPNVRGGGNG
SNAVVSTPDSRAEAPSACMDETAPKHNDAAAGGGLCGIGGDTGIPARDHIICASPDASAE
SASGYDYGGIADGSDEDGCGESSRDGDDDIEELVRNPDDANTDTSGPSPRTRKKTAGTSS
NFKGVSRQVLKVLNCMPRANDEGGLSTLCWRAFGRHRHTNKWEAHLWDSTAIRKKSQSMK
RARGKQIYLGSYETELEAARAYDIAAIVFWGSRANTNLPLEFYSEEIESLSKMSKEDVVN
MLRRQSSGLSRGGSKYRGVTPHRLGGTYEARIACLYLGCFGTAEAAAMAYDFAALHREGL
NAMTNFDPRRYIEEGVTTRTLRTFALLPEAVKSGFAKNIKTALGPEQSLATANGQETCCG
MDMGGDDQAAASKPMGVSSGMQAWKRQRTELAQPPAPELQSMLRPQVDVRQELPPSFLNP
GQELQHPPQLSYSSAAALEVSLMVDGLPPPAEPAAATAAAAAPVVDAPYLTLVAQKAANA
TGELFIREIPSGPTNKASDKRERLSCGGTTYVPASIARRSGSHFIAMVLMGNLAALEPSA
RTGQFAGYGTPTTMSQTTFRNQYLPH
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaatgcttagattacaactctgttccctcaaggctcgactatcagagagaggg
cctccgcccgcggctcggctcgcggctgctgtcgcgacgatgcaaacgtgtattagatcg
cgccttcacaactttgcttcagaacttggtcgtatacgacgattgctcgcgatgttctgc
actgttgctgatcaatacgcggatggtcagcacgtacacgacgggctcttgggcgacagt
ggcggcgaactggatgagctgcaatgctggcaacaggacctcgggggcccctggcccagt
agcgactgcagcgacggcggcgacgacagcgcctctgaaccggccccgctctccgcttgt
ccgtcggctccatctccagcggtggtagaacaccagcagcatcaaaaccagcagcatcaa
aaccagcagcagtaccaccactcattaatgcaggccgcccagcaacctgcaccgttgcca
cagcaaattacaccgctaccacagcacggtgtctgtgccaggggttccggaactagtgat
caatcggggatgcatcacgcatacgacgggattgttaccgacagtggcagcggtgtgcat
gaacatcaacggcagcaggaggccctcgtgggcggccgatggcgccaatacgagcaactg
cagcaaccacagccggagctcctgagagcagataagatcttcagtaatggcggttggctt
acactaccatggcagccgctggtgcagccgctgcagccccagccgctgccttccgtgttt
gtgccctccacacaatttactctgccattctgcaccggcagccgggctgtaaccagctca
actcaacagttcgtgcaacagcagccgggggtccccaatgtccggggcggcggtaacggc
agcaacgctgtcgtcagcaccccagactctcgagcagaagcgccgtcggcctgcatggat
gaaactgctcccaagcacaatgatgccgctgctggcggcggcctctgcggcatcggcggc
gacacaggtatcccggcacgggaccatatcatctgtgccagtcctgacgcaagcgccgag
tccgccagcggttacgattatggtggcatagctgacggcagtgatgaagatggctgtggc
gagagcagccgtgatggtgacgacgacatcgaagagctcgtcaggaatcccgatgatgcg
aacacggatacgagcggccccagcccgaggactcggaagaagaccgccggaaccagctct
aactttaagggtgttagcaggcaggtgctaaaagtgcttaattgcatgccccgggctaac
gatgagggcggattaagcactttgtgttggcgtgcattcgggaggcaccggcacacgaac
aagtgggaggcccacctctgggactcgacggcgatccgcaagaagagccagtcgatgaag
agggctaggggcaagcagatctacttgggatcttacgagacggagctggaggcggcaagg
gcatatgacattgcggctatcgtgttctgggggagccgtgccaacaccaatcttccgctg
gagttctacagtgaggaaattgagtcgctgtccaagatgagcaaggaggacgtggtaaac
atgcttcggcggcaaagtagcggtctcagccggggagggtccaagtaccgaggagtaact
ccgcaccgtctggggggtacctatgaggcgcggattgcctgcctgtacttgggatgcttc
gggacggcggaggcggctgccatggcgtacgacttcgccgccttgcaccgcgaaggtctg
aacgccatgacaaacttcgaccctcggcgttacattgaggagggcgtcaccacacgcacc
ttgcgcacgttcgcgttgcttccggaggcggtcaagtcaggcttcgctaaaaacatcaag
acggctctggggcctgaacaatcgttggcaactgccaacggccaagagacttgttgtggc
atggacatgggcggtgatgaccaagcggctgcctccaagccgatgggtgtgtcgtcgggc
atgcaggcgtggaagcggcagcggacggagctggcgcagccgccggcaccagagctacag
tccatgctgcggccgcaagtcgatgtacgacaggaactaccgccgagtttccttaacccc
gggcaagagctgcagcatccacctcagttgagctacagcagcgccgcagctttggaggtg
tccctgatggtggacgggctgccgccgcctgcggaacctgccgccgccaccgccgccgcc
gctgcacctgtagtggacgctccgtaccttactttggttgcgcagaaggcggccaacgct
accggtgaactcttcatccgtgaaatcccgtccggccctacaaacaaagcaagtgataaa
agggaacgattgagttgcggtgggaccacatacgttccagcatctatagccagacgttca
ggttcccacttcatagcgatggtgcttatgggcaatctggcagcccttgagccctcggct
cgtactggccagtttgcgggctacggcacgcccacgaccatgtcgcagacaacattccgc
aaccagtaccttccgcattga
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