Volvox carteri f. nagariensis: VOLCADRAFT_91671
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Entry
VOLCADRAFT_91671 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_91671
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_91671
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VOLCADRAFT_91671
DNA replication proteins [BR:
vcn03032
]
Prokaryotic type
DNA Topoisomerases
VOLCADRAFT_91671
DNA repair and recombination proteins [BR:
vcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VOLCADRAFT_91671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
9615391
NCBI-ProteinID:
XP_002951147
JGI:
91671
UniProt:
D8TXP4
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MAFPFEFTRYHTHLRLNRLLLGPQLRTTLASAVGNSASGRGGIPGTSVLSPVLRAGAGVS
GLWVPSPLIGSVAAARRRGERHDNSDKRSCYVAVAAATARGGGGGGGAVAVAEPVTGRVE
DTELYDEAYNSYLSYAMSVIVSRAIPDVRDGLKPVHRRILYAMHELGLVHNKPFKKCARV
VGEVLGKFHPHGDTAVYDSLVRMAQPFAMRQTLVDGHGNFGSLDNDPAAAMRYTECRLTR
AAGEALLADIGPDTVDWQPTFDESQVGLASNIPPHNLGEVVSALRALITDPRVTTEELLK
HVRGPDFPTGGEVVVGPELLQVYETGRGSVVVRGKATIERVGGGSGGGGGGDDGGGNDEV
ATAAGRTRRRRGAAAAAAAAQAVDEDIGGGRGGSGRELVVITELPYQVYKSDLVASIAEL
IESKQLEGASDVRDESDRTGVRVVVEVKKGYSGKVVLAQLYNSTRLQVNFHYNCTSLLNT
KPLQMGLKDMLLAFLDFRCDVVQRRSSASLRAAQQRLHLVEGFLRLLREEGRLDAVVADV
RAAEDGGAARRALVAKHGLSEEQAEAILGLTLRRLTGLEAAKLDQERRELQQSIARLGDI
LANRTTLLAVVEQEAEALAAAFPEPRRTALVAAEDVPATPSLESLVPPKPCLVLASRRGF
LRRLAGDSLTAQNRNTRGKSGIRLRSGDQLASLVAGSDRDLLMVVTPDGRMFKTRTAAVP
PSSSSASSASPTAAAASGGTESVGRMKEVEDAGSEAKEEEEVEGEDVGGAVAGPCLVLCT
RGGRIKRLALKNRRESKKGIMVMGLESSSSKATGDGRDSSSSSSARDAASKKKGPDEAGE
EELCWAALSRSPGDVVVVASAEGQVLLFPATDVRVSGPQSAGTHAMRMSKRRPNDRIADI
TVLPAELAPLLGSQLPTTASASAGTATAASERGEDVAEDGDDDGEEEEEEGGEQGLTAAI
DEEQEGEQEEGEEETSSRGPAGPCLLLVTAHGIGKRIPLGQLRLGMRRQAGMVAIRVASA
ERARQRSRRSSSGGTAAQWQQQEQQQQGAAGPDHVVAVLVVRDGEEVIMASRNGVVVRQS
VDGIAVQGRMTRGTFVMQLDGGDEVVDVVAAAPEVPPPRPPRAAAAAAAAATATAAHAAP
SGGGTVGKGRGRGRRVAIT
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcattcccctttgagttcacgcgttaccacacgcacctccgcctcaaccgcttgctt
ttgggtccacagctccgcaccactctcgccagtgctgttggcaatagcgcctccggccgt
ggtggcattcccggcactagcgttctgagtcctgtgttgcgcgcgggagctggggtcagc
ggtctttgggtaccatccccactcatcggctctgtcgccgccgctcggcgccgcggagag
cggcatgacaacagcgacaagaggagctgctacgtggccgttgctgccgccactgcccgc
ggcggtggtggcggcggcggcgccgtggcggtggcggagcccgtcactggccgcgttgag
gacacggagctgtacgatgaagcgtacaactcctacctttcgtacgccatgtcagtcatc
gtaagcagggccatcccagatgtacgagacggcctcaagcccgtacaccgccgtattctg
tacgccatgcacgagcttggccttgtgcacaacaaacctttcaagaagtgcgcgcgcgtg
gtgggcgaggtgcttggcaagtttcatccgcatggcgatacggcagtgtacgactcgctt
gtacggatggcccaaccgtttgcgatgcggcaaacgctcgtggacggtcacggcaacttt
ggcagtttggacaacgacccggcggccgctatgcgttatacggaatgtcggttgactcgg
gcggctggggaggcccttttggcggacattggacccgataccgttgactggcaaccgact
tttgatgaatcgcaggtgggccttgcgtcaaacatcccgccgcataatctaggggaggtg
gtttcggcgctacgggccctcatcactgacccacgggtcaccacggaggagctcctgaag
cacgtgcgtggaccggacttccccacaggtggcgaggtggtggtgggacccgagctcttg
caagtgtacgagaccggaaggggttcggttgtggtgcgcggcaaggcaacgatagagcgg
gtaggtggaggcagcggcggcggcggcggcggtgacgacggcggcggaaatgatgaggtg
gcgacggcggcgggtcggactcgccgccgtcgtggagccgctgcggcggcggcggcggca
caggcagttgatgaggatattggcggcggtagaggtggaagcggtagggagcttgtcgta
atcacggagctgccgtaccaggtgtacaagtcggatctggtggcctctatcgcggaactc
atcgagtctaaacagctcgaaggagcgtcggatgtacgggacgagagcgaccgtacgggt
gtacgggttgtagtggaggtcaaaaagggttacagtgggaaggtggtcctcgcccaactg
tacaacagtacgaggttgcaggtaaacttccactacaactgcacatctctgctaaacacg
aagcccttgcagatgggtctcaaggacatgttgctggcgtttctggacttcagatgtgat
gtggttcagcgccgctcctccgcctccctccgagccgcccaacagcggcttcacctcgtg
gaggggttcctcaggctgctgcgggaggagggccggctggatgcggtggtggcggatgtg
cgggcggcggaggacgggggggcggcgaggagggcactggtggccaaacacggactcagc
gaggagcaggcggaggctattttgggccttacgttgcgccgtctgaccgggttggaagcc
gctaagctggaccaggaacgccgggagctgcagcagagcattgcgaggctgggggacatt
ttggccaaccgtacgacactgttggcggtggtggagcaggaggcagaggcgctggcggcg
gcgtttccggaaccccgtcgtacggcactggtggcggcggaggatgtacccgccactcct
tccctggagtccctcgtcccgccaaagccctgtctcgtactggcatcacgtcggggcttt
ctgaggcggttggcgggggactcgttgacggcgcagaaccgaaacacgcgaggcaaatcg
ggaattcggttgcgcagcggcgaccagctggccagcctggttgccggctccgaccgggat
ctgctgatggtcgttacgccggacggcaggatgttcaagacacggacagctgccgtaccg
ccgtcgtcgtcatcagcctcatcagcctcaccaactgctgccgcggcctccggtggcacc
gagtctgtcggccggatgaaggaggtggaagacgcgggatctgaagcaaaggaggaggag
gaggtggagggcgaggacgtgggcggggcggtggcgggcccgtgtcttgtgctgtgcact
cggggcgggcggataaagcggctggcgctgaagaaccggagggagagcaagaagggcatt
atggtgatgggcctggaatccagcagctcaaaagccactggcgatggtagggatagcagc
agcagtagcagcgcccgcgatgcagcctccaagaagaaggggcctgatgaagccggggag
gaggagttgtgctgggccgccctgagccgctcccccggggatgtggtggtggttgcctcc
gcggagggacaggtgctgctgtttcccgccacggacgtgcgggtttcggggccgcagtcg
gcgggaacacatgccatgcggatgagcaagcgccggcccaacgaccgcatcgcggacata
accgtgctgcccgctgagttggcgccgctgctgggatcccagctacctaccactgcctcc
gcctccgctggcactgctactgccgcgtccgagcgtggggaggatgtagcagaggacggg
gatgacgatggggaggaggaggaggaggaagggggagaacaaggattgaccgcagctatt
gatgaggagcaagagggagagcaagaggaaggagaggaggaaacgtcgagccgtgggccc
gccgggccgtgcctgctgctggtaactgcgcacggcattgggaagcgaattccgttgggt
cagttgcggcttggaatgcggcggcaagcaggcatggtcgcaatccgcgtcgcgagcgcc
gagcgcgcgcggcaacggagccgccgcagcagcagcggcggtacggcagcacaatggcaa
cagcaggagcagcagcagcagggggccgctggacccgaccacgtcgtggcggtgctggtt
gtgcgtgacggtgaggaggtgatcatggcatcgcggaacggtgtcgtggtacggcagagc
gttgacggtattgccgtacagggtcgcatgacgcgcggcacgtttgtgatgcagcttgat
gggggggatgaggtggtggatgtggtggcggcggcgccggaagtgcctccgccgcggccg
ccgcgagcggctgctgcggctgcggctgcggctacagctacagcagcacacgctgcgccg
agtgggggaggcaccgtgggaaagggtcgaggccggggaaggagagtagcgataacataa
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integrated database retrieval system
