Volvox carteri f. nagariensis: VOLCADRAFT_92129
Help
Entry
VOLCADRAFT_92129 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
Motif
Other DBs
NCBI-GeneID:
9615620
NCBI-ProteinID:
XP_002951615
JGI:
92129
UniProt:
D8TYP0
LinkDB
All DBs
Position
Unknown
AA seq
2379 aa
AA seq
DB search
MAAWQERGSGLYDISNVAPRHASRHGKMPVESPVQLFLALIEAAGVRGWVTPERGGGAAA
MSAAAAAAVAGPLEVADPRRLRRHLESRLKRDEAVRQRWLQGLQEACEDVEALHRLPGVR
LPQRGLDLVPERFTCTAGSGRVVMRAVAAGIPSFGVSWGWRVCSHPSIRLRMRVYGMYII
MFRTIPYALTKVPVATWLLQRLPVLAMAEPPDGGGPSVPSGLRGVAAGGPECTGGVPGLI
LSQLRWLDVLPDCGGFGAGDGSTDGNRSGGGGGGGGDGGSSSLVDVVLEVLPLTPPGLQR
QLIELLPEVAAGDDHPRIVEKLGELLDSELGFVAPSLEALQQLQLGQELLDQVVLDMVQR
LPGVDSDDLPALVRFVVQYSTGPPSPGASASAAAAATAAAATAPHVIAALRGGLPMVDLS
DPRVSVPDLKGKRGGGGGGREPVEVRVLRELAVALAANDAAAGAVLRAISAAGRRSGRAG
SSGSSAPDLDPHTGDGEDQAKEDLDLDPGGRGGGAAGAAAATAALADGPEKLVPLDLWIL
MTLLGGRRGKEADKILRAKICDGTASPAWLSSVLLGHSAAVREVWSASLALAASLAPSRT
STPGGPALAAAAARLYAVLFTAVGGGPDGSLQRIEVLHALHSHLGSGVSEEVDTALGALW
QLAEGPLSRPPKAFAAGGGGDGPPAPVLSQYGSALSNCLDHLESFTDSQLSRLFDVLAAV
TGGSEGVAWRAAAEARSAGSGRGDGGGGPGRRAAVRVAGGAGGRLESEVQIVVDKALKGT
ASYKRIGIAGALAFLRRVGGALVLLEGGGGGGGGGREDGDGGGVDGFGLLLTEWRSRLDD
LVTATEGHGAARALALGLINDMIRAPVAAGGGGGSAAGDGGGAGAGGAGGAGGAGGAGGA
GGAGGAGGAGGGDASEVSRFWGSTLPRAALEELSAVVQAGLLEPALVVDLPLQGEGSAAA
AAGDSAGLVPEVGGPPSELWPLAASSAVRERDVLMWMGPCLSLVCLVSRLLFGDLQDVDG
LLGCPLVMFPVELIQDDEGVNHLHELPVAVSGAVLTCLQAASTWLREVINCFSPTVPTAL
QGHPWSQVSTAKLAKRVSHCAALEALAAALIDNLAAPRGGLAAIQALRNHADPMGRMQQK
RGGSGASVGAAVAATSSGAGAVKRVGGAAATAAAGGGTAATRAAAVLGFRRCLRPLTLVG
AAETLRQLLTSRPPGTYGSHATVAAEPGERQQAGDDGDGGEEDVSGNWSAWTVLPVRLAA
ASYLLSELAAKAAAVAARAKNTPAFALSGPAAAAAATDPSLERLAPADVAAVLGGLMPSV
RKHLDSATAALAGARFLTPANNIYLQPTSDGDGKHVLAHLDAVQAALEPAATAAHYVMDI
LELLRIFFGSFVPPGVGGGGGRGRGTATAAAAAPPPLWALVAVLVSLAAKPGVDGVPDAG
LKQLADAASGAPGATERALNTAQGEALCQLAWTAFQQLSSQCQGLGPSVPQGHGTTGRHN
NNNNSNSPKPAPPDVWRELALLRAGRALLSSVRHLAVPYAAATNLVTQAMGQVPEGGQGK
ASGGGRSAAAAAAAAAVSEPIAGYASLSAATLPAWYRGTFEALLERWGATCARMRVSERR
VPGQDEEEELMSEMVCSSEVFSRLMQLIRKHPGKNPLITTAIKCGGKFVELNSPFQRHLH
AFLSLSFAAHNFPTSLPRMCLCPLLLLPGQMGCADGIRIAQLKNKDIHGNEVASQAYGGF
DDDDDGGDDDDDGGGGYGNGNGNEDEEQEHDGGGGDRGTGGGSQGAAKKKARSGGGGSGG
GGGGSGGGGRGRGKRAAGGTGTAEGDNGADVAVAPKAKKSRKPKGGPPPPAAAAAAADEA
AAAGAVAAAAPPPKVPRKPRKPKAAAVAPEAEVYGNADGDGEPYVGLKLVNQNNRQKPTD
NQAGGLLKFPGTPGSAETQMPVAEASTTRSRTRRDPHHLISSCVSASAAAWDLVVRPVIL
RNTEQIQILKSALLEVQALLEKHATAPLHVVRGWLVEVHHAATFNLSAVASESSLRAMLG
ERDSDVDINIVDTRAGKLVDQAQSKFYENLKVLRKRLRNPRYGPMQKIVPADRPVPGASP
RLTAHSGGNIVSSAPLTLAQGEQLVTHPVRHFTALRPNVPLDAVRNGAAAAVVGAVMGCT
SSLLFLYFNGRGDCRKLLAAPAARPDTDTNTDTKGKGLGSGGESENCRVGETVRIVAETA
ALSGVAAGLGAVASTLTANALLGSLSAGMVGVMCNSLMGSAREGRVVEAAGVVVGACASS
ACWAALPLGGPLAAVACPAMSYFASSGAQMLARRVQESFQLKSKQVGALGPGGGGVPPTT
SPPRLPHGAKTLQRVQNHAARVLVSYVSYELRNPASLLR
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttggcaggagcgtggcagtggcttatacgatatttctaacgttgccccgcgg
cacgccagcaggcacggcaagatgcctgtggagagtcccgtccagcttttcctggcgctg
atcgaggcggccggtgtccgcggctgggtgaccccggagcgcggaggtggggcagcagca
atgtcggcggccgcagcggcggctgtagccgggcctctggaggttgcggatcccaggcga
cttcgacggcacctggagtcacgtctgaagcgggatgaggctgtacgtcagcggtggctg
cagggcctgcaggaagcctgtgaggatgtggaggccctgcacagacttcctggagtgcgg
ctccctcagcggggcctggacctggttccggagcggttcacctgtacggcgggttcgggg
agggtggtaatgcgggcggtagctgcggggattccttccttcggtgtgtcctgggggtgg
cgtgtctgcagccatccgagtatacgacttcggatgcgtgtgtacggcatgtatatcatt
atgttccgtacaatcccgtacgcgttgaccaaggttcccgtggcaacgtggctcctacag
aggttgcctgttttggcaatggcggaaccccccgacggggggggcccctccgtgcccagc
ggtcttcggggagtggcagccggcgggcccgaatgtacgggcggcgtgccgggccttatc
ctcagccagcttcgatggctggacgtccttccggactgcggcggtttcggagccggcgat
ggttctactgatggcaatcgtagtggtggcggtggtggtggtggtggcgatggtggttcc
tcttcccttgtggacgtggtgttggaggttctccctctgactccccccggactgcagcgg
cagctcattgagttgctaccggaggtggcggcaggggatgaccacccgcgtatagttgag
aagctgggcgagctgctggattcggaactgggtttcgtggcgccctccttggaggctttg
cagcagctgcagctggggcaggaactgcttgaccaggtcgtgcttgacatggtgcaacgc
cttcctggggtagactcggacgacttgcccgcacttgtacgatttgtcgtacagtacagc
acagggccgccctcgccaggcgcctccgccagcgctgccgccgccgccactgccgccgct
gcgactgcgccgcacgtcatcgcagcgttgcgaggcgggttacccatggtggacttgagt
gacccacgggtcagtgtgcccgatctgaaaggaaagcgtggcggcggtggcggcgggcgg
gagccagtggaggttcgtgtgttgcgagagttggcagtggcgctggcggcgaacgacgcg
gcggcgggtgcggtcttgcgggccatatcggccgccgggcgtcgcagcgggcgcgccggc
tccagcggatcatctgctccggatctggatcctcatacaggcgacggtgaggaccaggcg
aaggaagatctggatctggatccaggaggccgcggcggcggtgccgcaggagccgccgcc
gccacggctgctttagctgacgggcccgaaaagctcgtcccactggacctttggatcttg
atgacgctgctgggaggtcgccgagggaaagaagcggacaagattttgcgcgccaaaatt
tgcgatggcactgccagccctgcatggttatcctccgtgttgctcggccactccgcagct
gtacgggaggtgtggtccgcctccctggccttggcggcctccctggcgccaagccggacg
agcacccccgggggcccagcgctggcagctgcggccgcccggctgtatgcggtcctgttc
acggctgtgggaggagggccggacgggtcgctgcagagaattgaggttcttcacgctctc
cactcgcatttgggttccggggtgtccgaggaggtggacacagccctcggggccttatgg
cagctggcggagggcccgctctcaaggccgcccaaggcctttgcagccggcggcggcggc
gacggccctcctgctccggtgttgtcccagtacggcagtgccctgagcaactgcctcgat
cacctggagtccttcacggactcccagttgagtcggttgttcgacgtgctggcggctgtg
acggggggctcggaaggtgtggcgtggagggccgccgcggaggcgcgttccgctggtagc
ggacgcggcgacggcggggggggccccggccgtcgagctgccgtacgcgtcgccggcggc
gctggtggccgcctggagagcgaggtccagatcgtggtggataaggctctgaagggtacg
gcgtcgtacaagcggatcggcattgccggtgccctggcgtttctgcgccgcgtcggcggc
gcgcttgtacttcttgagggcggcggcggcggcggcggcggcggtcgcgaggacggtgat
ggcggcggcgttgacggctttggtcttctcctcacggagtggcgcagccgtctggatgac
ctcgtaacggctacagaggggcacggggcagccagagcactagctctgggccttatcaac
gacatgatcagggcgccagtggcagcaggaggtggcggcggcagcgctgccggagatggt
ggtggagctggtgctggtggtgctggtggtgctggtggtgctggtggtgctggtggtgct
ggtggtgctggtggtgctggtggtgctggtggtggtgatgcttcggaggtatcccggttt
tggggatcgacgttgccccgcgcagccctggaagagttgtcggcggtggtgcaagcggga
ttgttggagccagcactggtggtggacttgccgctgcagggggaggggtcggcggcggcg
gcggctggggactcggcgggtttggttccggaggtcggagggccgccgtcggagttgtgg
ccgcttgctgccagttcggctgttagggagcgggacgtgctgatgtggatgggaccctgc
ctcagcctggtgtgtttggtcagtcggttgctgttcggagacctgcaggacgtggacggg
ttgttgggatgtccgttggtgatgtttcccgtggagctgatccaggatgatgagggtgtc
aaccacctccatgagctgcctgtcgcagtgtccggtgcggtgctgacatgtctgcaggcc
gccagcacctggcttagagaggtgatcaactgcttcagccccaccgtaccgactgcgctc
cagggccacccctggagtcaggtcagcaccgccaagctggccaagagagtatcccactgc
gcggctctggaggcgctggcggcggcgctcattgacaacctcgcggccccgagggggggt
ctggcggcgatacaggcgctccgaaaccacgcggatcccatgggtcgcatgcagcagaag
cgtggaggatctggtgcgagcgttggcgctgctgtggccgcaacaagcagcggtgctggt
gccgtgaagcgcgtcggcggtgctgcagcaacggccgccgccggcggcggcaccgccgct
acccgcgcggcggctgtactaggcttccgccgctgtcttcggccgctgacgctcgtcggc
gccgctgagacgctacggcaattgctgacgtcacggccgccggggacgtacggtagtcat
gcgacggtggcggcggaacctggtgagcgacagcaagcaggcgatgatggcgacggcggt
gaggaagatgtcagtggcaactggtcagcttggactgtgcttcctgtgaggcttgctgcc
gcctcatacctcctgtcggaactggccgccaaggcagcggcggtggcggcccgcgccaag
aacacgcctgccttcgcgctcagcggtccggcggcggcggcggccgcgacggacccctcc
ttggagcgcctggctcccgctgatgtggcggcggtgctgggaggtctcatgccgtctgta
cggaagcacctggactcggcaactgcggcgctagctggtgcccgcttcctcacccccgcg
aacaacatctacctacaaccgacgagcgacggcgacggcaagcacgtgctcgcgcacctg
gacgccgtacaagcggctctggagccagccgctactgctgcgcattacgtcatggatatt
ttggagctgttacgaatcttctttggttccttcgtaccgcctggcgtcggaggaggcgga
ggtcgcggccgcggtacggcgacggcagcggcggcggcgccaccgccgctatgggcgctg
gtggcggtgctggtctccctcgcagccaagcccggagtagacggtgttcctgacgcgggg
ttgaaacagctggcggatgcggcttcgggagctccgggtgcgactgaacgcgcccttaac
accgcacagggggaggcactatgccagctcgcatggacagccttccagcagctctcctcg
caatgccagggcctaggaccctctgtaccacagggacacggaacgaccggccgacataac
aacaacaataacagtaacagccctaaacctgcacctccggacgtgtggcgggagctggcg
ttgttgcgcgccggccgggctttgctctctagtgtacggcacctggcggtgccgtacgca
gcggccaccaacttggtgactcaggcgatggggcaagtgcccgagggcggccaaggcaag
gccagcggtggcggtcgcagcgccgccgccgccgcggcggcggcagcggtttcggagccc
attgccggctacgcgtctctgagtgccgccaccctccccgcctggtatcgggggacgttt
gaggccttgttggagaggtggggggctacgtgtgctcggatgagggtttcggagcgtcga
gtgccggggcaggacgaggaggaggagttgatgtctgagatggtttgcagctctgaggtg
ttttcccgcctgatgcagctcattcgaaagcaccccggcaagaacccgctcatcaccacg
gccatcaagtgtgggggaaagtttgtggagcttaatagtccctttcagcggcatctgcat
gcgttcttgtcattatcgttcgctgctcacaactttcccacctctctgcctcgcatgtgc
ctctgcccgctgcttctgctgcctggccagatgggttgcgccgatgggatccgcattgca
cagctcaagaacaaggacatacacggcaacgaggtcgcgtcgcaggcctatgggggcttt
gacgacgacgatgatggtggtgacgatgatgatgacggcggcgggggctacggcaatggc
aatggcaatgaggatgaggaacaggagcatgacggcggcggcggtgacagaggtacggga
gggggctcccagggtgccgcgaaaaagaaggccaggagtggcggcggcggcagtggtggc
ggcggcggcggcagtggtggcggcggcagaggccgaggcaagcgagcagcgggcggcacc
ggcactgctgaaggtgacaatggcgctgacgtcgcggttgcacccaaagcaaagaagtcg
cgtaagccgaaggggggcccgccgccgccggcagcggcggcggcggcggcagacgaagcc
gcggcggctggggcagtggcggcggcggcgccgccgcccaaggtaccccggaagccacga
aagccaaaggcagcggcggttgcgccagaggcggaggtgtacggcaacgctgatggcgac
ggggagccttatgtggggttgaagctcgttaaccagaataatcgtcagaaaccaacagac
aatcaagctggaggattgctcaagtttccagggacacctggaagcgccgagacccagatg
ccggtagcggaggcttctacgacccgctcccgcacacgccgagacccccaccacctcatc
tcctcatgcgtctcagcaagcgccgcggcgtgggacctggtggtgcgcccggtgatcctt
cgaaacaccgagcagatccagatcttaaagagcgccttactggaggtgcaggccttactg
gagaagcatgccaccgcgccgcttcatgtagtgaggggctggcttgttgaggtgcaccac
gccgccactttcaatctcagcgctgtggcgtcggaatccagcttgagggcaatgctggga
gagagagacagcgatgtcgacattaatatcgtggacacgcgagccggcaaactcgtcgac
caagcgcagtccaagttctatgaaaacctgaaggtcctacgaaaacgtttgcgcaacccg
cggtacggccccatgcagaagatcgtaccagccgaccgccctgtcccgggcgcctcaccg
cgcctgacagcacacagcggcggcaatatcgtaagcagcgctcccctcacactggctcag
ggtgagcagctagtcacccatccggtgaggcacttcaccgcattgcggccgaacgtgccg
cttgatgccgtacgcaatggtgcggccgccgcggtagtgggcgcggtaatgggctgcacg
tcatcgctcctgttcctttacttcaacggccgcggggattgtcgaaagctacttgcagcg
ccggctgctaggcctgacaccgacaccaacaccgacaccaagggaaaagggttgggaagt
ggcggggaaagtgaaaactgtcgagtgggtgagactgtgcgcatagtcgcggaaaccgcg
gcccttagcggtgttgcagcgggactgggtgcggtcgccagcactctcaccgccaatgcg
ctgctggggagcttgtcggccgggatggttggggtgatgtgcaactcgctgatgggtagt
gcgagggaggggcgggtggtggaggcggcgggtgtggtggtgggagcgtgtgcgtcatcg
gcctgctgggcggcgcttcctttggggggtccgctggcagcggtggcttgtcccgccatg
tcctactttgcaagttctggggcgcagatgctggcgcgaagggttcaggagagttttcag
ctgaagtcaaaacaggttggagcgctggggccgggagggggcggcgtacccccaaccact
agtcccccccggttaccacacggcgccaagacgctacagcgggtacagaaccacgctgca
cgcgtccttgtgtcgtacgtttcgtacgagcttcgaaaccccgcatctctgctgaggtaa
DBGET
integrated database retrieval system