Volvox carteri f. nagariensis: VOLCADRAFT_93432
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Entry
VOLCADRAFT_93432 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K23288
syndetin
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_93432
Membrane trafficking [BR:
vcn04131
]
Protein recycling
Others
EARP complex
VOLCADRAFT_93432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
COG5_N
Motif
Other DBs
NCBI-GeneID:
9627247
NCBI-ProteinID:
XP_002952743
JGI:
93432
UniProt:
D8U241
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MAEKEGGFGQNVLGKLKLVGGKVVDFGGTVAGRVADVGGTVGNKIGDFGNKIVDVATKPL
FESDFERLRQLNQIAQQQQDLRRKYTEQELLAVEARADLVLGQLYTGYFEPNFDPVAHEL
SKLTDSDNQDHIDELVERLTQGVETVSGRLSRHVNKKRDVLLAGIDRVAEIEDDLKAAFL
ISRSSRATLKAAAEEVQRNMRVVGQTRRKQSFMELMEVISKIKRARDLQHSLKKSQELGE
YGDAIMTCVQCFQGLESLGQLTVSAELRASVQRLYLDTLRRLDGALTNICAEFDPDKYTK
LLEGYLLQGIDGKALAEKVLQCFKDSIHDVTTRIVRSLLLTKPKLADRLAAGASATSALQ
LGYSEMLRAMPPDLLRPCLLRLLETVFDVLSSYHVMAQWHGLAVQKESQMAAAAQGMNEE
DRRAQTTTAAFLAAVNDVLKVSRAEVLDTAGRRIKDMLAMDTLFKGEDFLQVVDWCGNFG
AMGEAFLGGPTELRPQVMALCARFLPAYHRSNLESLTTCLNNEAWQDVGAVTGASGAVTL
ELDVAILHSPLYMPHWEEEGAVTSFDKWITDGNPFKRGSGQGAMPEGRQKSLVDLLNRTT
AEGKQLSRNGSQQSSLGDVAAAAANGGDAAAAATCATPTTPGEEEGPARTSASSTAGEPA
AATAAAVPGTPGGTEAVVEQSSSLGPAGLSGGSSSSGGAEGGGGGPGNRGPPRRLAMLTI
SSQQALKYMKHYGELMRPLEGYSETLYRCLTEIFDVFLLYCFSAFGGLGLEDLVWRDDLL
SPRLKGALLRILIAEGSKYKPVIEELARNKPVGRGAPIASTGLGLLDRFGDKMESLADTM
ERSVSRMAVKLGDSKVVQVMGGSGDSSIGGGVQGSGASMVGFPQVSAPNTGMLTPLGGPR
ASVPMGGVGGVSGAHNGGSPGPSQGSPSSSGGSFHAPQWGLRERVVAVESLIYMAQELKA
AKQAIILALPGRCQRDVEQYFNRTVEAAADLREYLFKAAARVMMQGVWDGDRGIPAAIGV
TNYNVREPAIKQSPWADFSVRALHTFREKVLAARLPLPLVVLLWDFAVAVVTEGLLTGLA
GVRKCSLEGRANMSFDLSHVERQIRAMGPPNFKPTALAIVDAYIKAFYLPWEELPHWCRT
HVAQYGKQRLFTLVEVSAEFNKVKRHQKNEVLEMIEALDPTKSF
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaggaaggcgggtttgggcagaacgttcttggcaagcttaagcttgtcggt
ggcaaggtcgtcgacttcggtggcacggtagctggaagagttgcggatgttggaggcact
gtcggcaacaaaatcggagactttggaaacaaaattgtggatgtggccaccaagccgttg
ttcgagagcgactttgagaggctcaggcaactaaatcagattgcccagcagcagcaggac
ctccggcggaagtatactgaacaggagcttttggcagtggaggcacgggcggacttggta
ctcgggcagctgtacacaggctactttgagccaaactttgacccagttgcacatgaactc
tcgaagctgacggactcggataatcaggaccacattgacgagttggtggagcggctgaca
cagggcgtggagactgtcagtggtcgtctgtctcgccacgttaacaagaagcgggatgtg
ctgctggctggcatagaccgcgttgctgagatagaggatgacctgaaggccgccttcctc
attagccgatccagccgggccacactcaaggcggcggccgaggaggtgcagcgcaacatg
cgggtggtgggccagacccgccgcaagcagagcttcatggagctgatggaggtcattagc
aaaattaaacgggcgcgcgacctgcagcactcgctaaagaagtcacaggagcttggcgaa
tacggtgatgccatcatgacatgtgtgcagtgcttccaagggctggagtcgctcgggcag
ctcacggtctcagcggagttgcgtgcttctgtacaacggctgtacctagacacgctgcgc
cgcttggacggggcgctgaccaacatctgcgccgagttcgaccccgataaatacaccaag
ctcctagagggctacctgcttcagggcatcgacggcaaggcgctcgcagagaaggtgctg
cagtgcttcaaggactccatccacgacgtcaccacgcggatagttaggtccctgctgctt
accaagccaaagctggccgaccgcctggccgctggcgcctcagccacctcggcactgcag
ctaggctacagcgagatgctacgcgccatgccgcccgacctgctgcggccctgcctactg
cgactgctggagacggtgttcgacgtgctgtcgtcataccacgtgatggcgcagtggcac
gggcttgcggtgcagaaggagagccaaatggcggcggcagcacagggcatgaacgaggag
gaccgccgcgcacagaccaccacagcagccttcctcgccgccgtgaacgacgtcctcaag
gtctcccgtgccgaggtgctggatacagcaggccggcgcatcaaggacatgctagccatg
gacaccctgttcaagggggaggacttcctgcaggtggtggactggtgcggcaacttcggt
gccatgggggaggccttccttgggggccccacggagctgcggccccaggtgatggcgctc
tgcgcacgcttcctccccgcctaccaccggtccaacctcgaatccctgacaacctgcctc
aacaacgaggcctggcaggatgttggcgcggtgactggtgcctcgggcgccgtgactctg
gagcttgacgtcgccattctgcactcgcctctgtacatgccgcactgggaggaggagggc
gcggttacctcgttcgacaagtggatcacggacggcaacccgtttaaacgaggtagcggg
cagggtgccatgcctgagggccgccagaagtccctggtggacctgctcaaccgcaccact
gcggagggaaagcaattgtcccggaacggcagccaacagagcagcctaggggacgtggct
gccgccgccgctaacggcggcgatgccgctgccgctgccacctgcgcgacccccaccacg
cccggcgaggaagaaggccccgcaaggacgtctgccagcagcaccgcaggggagccggca
gcggcaaccgctgctgccgttcctggcacgcctggcggcacggaagcggtagtggaacag
agcagttctctgggaccggctgggctgagtggtggtagtagcagcagtggcggcgcggag
ggcggaggaggcggtcctggcaaccgcgggccgcctcgccggctggccatgctcaccatt
tcctcacagcaggcgctcaagtacatgaagcactatggcgagcttatgcggccgctggag
ggctactcggagacgttgtatcgctgtcttacggagattttcgacgtgttcctgctctac
tgcttctccgcctttgggggcttggggctggaggacctggtgtggcgagatgacttgctg
tccccgcggctcaagggggcgctgctgcggatcctgatagcggagggctccaagtacaaa
cccgtgatcgaggagctggcccgcaacaagcccgtcggtcgcggggcacccatagcttcc
acgggtctgggactgctggaccgattcggagacaagatggagagcctggccgacactatg
gagcgatccgttagccgcatggcagtcaagctgggggacagcaaggtggtgcaggtcatg
ggtggcagcggggacagcagtatcgggggcggtgtgcagggcagtggagccagcatggtg
ggctttccgcaggtctccgcgcccaacaccggcatgctcacgccgctggggggcccacgg
gccagcgtgcccatgggcggcgtcggcggcgtcagcggcgcccacaacggtggcagcccc
ggcccttctcagggcagcccaagcagctccgggggcagtttccatgcgccccagtgggga
ttgcgggagcgagtggtggcggtggagtccctcatctacatggcgcaggagctcaaggcg
gcgaagcaggccattattcttgctcttcctggccgctgtcagcgcgacgtcgagcagtac
tttaaccgcacggtggaggccgcagcggacctgagggagtacctgttcaaggcggcggcc
agggtcatgatgcagggcgtgtgggatggtgaccggggcatccccgccgccattggggtc
accaactacaatgtcagggagcctgccattaagcaaagtccttgggctgacttttccgta
cgggcgctacacaccttcagggagaaggtcctcgccgctcgtctgccgctgccgctggta
gtgctcttgtgggatttcgcggtggcggtggtcacagaggggctgctcaccgggttggca
ggggtgcgcaagtgtagcctggagggacgggccaacatgtccttcgacttgtcgcatgtg
gaacgacagattcgggcgatgggtccacccaacttcaagcccactgctctcgcgattgtg
gacgcatacatcaaggccttctacctgccgtgggaggagctgccgcactggtgccggacc
cacgtagcccagtatggtaagcagaggctcttcactctggtagaggtgtcggcagagttt
aacaaagtcaagaggcatcagaagaacgaggtactcgagatgatcgaggcgttggacccc
accaagagtttctga
DBGET
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