KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_94425
Entry
VOLCADRAFT_94425  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VOLCADRAFT_94425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_94425
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_94425
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VOLCADRAFT_94425
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    VOLCADRAFT_94425
SSDB
Motif
Pfam: Nup96 ExsD_C
Other DBs
NCBI-GeneID: 9616178
NCBI-ProteinID: XP_002953614
JGI: 94425
UniProt: D8U4S0
LinkDB
Position
Unknown
AA seq 1083 aa
MLTSGRRASCFEPCACTRNYSFQDESLLFYGSAGAEQDMSEACAQLRFGDDMVAEGEVSG
GVIGPETAALGGRGVAGGGGRAAVAGRAAAMVAAAAATAGVTAVTAWRRPSAALAPGAPA
AVMARGEELLSAADGVAGGGGFGGAIASSPISLALARPVTSRPMAAMTDFAAAAVLPLRE
VRTAGNLTDAGLAMGRSFRVGWGPEGRLVVPGAADAATATEICVTRVRVEGEGAAYGEAS
YGSGAISAGSEEAEALEALRDRLRAGLEVHLAASQPQKAAADCDNQDAAASGDSIVPHWR
LAVDSRELTVLVERHVRVCEKQLQQLTGGSGASGGADGAGRSGCGGAAVDGDVDHPDARR
LRHEIETWRLVETLFAKIDGEVPSDGTAGDEAEQGSPPGATQVPLRLTTGSPLVPASRGA
GDMMVLSTPPSKSLPSASAKDAAVLPPEYEMNDEGDGEASDVEAGEAGGGGDASRLSSQR
PMPSPTLLAAHQRRAQLSLWLQRQARRRVEEDLLTASSCAAVVLQLLAGHQLGAAVGAAV
AGGDPRLAMLIARLMVWQQSGFLEHMVPERLAAYQLLSGEVLEPQRLMSLDWRRLLGLYL
WYGTPNTKSPVTAVNQYMMDRHAEPSIVPHPAPYHVEGLQPSATGAVAGSSAATSGSTDV
QWELLQLWATTPAAATADCLASGQEATATGVAAAAARALGAWLAGGGCSRLLRCSGYSPN
PLDHSLAWYLMTALQAAGVLPRPRTLGGIDDGHGASAAAYDNEMLTTTLEFISQLQLAGG
LCEWAVFVALTIPDLEEGGPAVRQRVVQELLALTVPEWAGDSSRELFLEGTLSVPEQLLA
KARATWAQYTRDDDARCAALLAAGDAAAAHDVFVSSVAPALFLSGAWDELARLVADLEPA
ATAIPSWSTGGGLYGGYLAIFGRQLVAATVAAAGSVGSGGGAAPAMPEGVTLEALIEFAM
HVQEAQMALNAAGSGDMVAAGGCVGGAATPQALDETAERSRLRRRLVLSRISARLHGALM
SVSATAVAVQADGGTSGPAADLEARCAGLQSALALQGCLVAELQLGGVAVAVAEAGARVA
CSS
NT seq 3252 nt   +upstreamnt  +downstreamnt
atgctcacttctgggcgacgcgcatcgtgctttgagccatgcgcttgcacacgcaactac
agtttccaggatgaaagtcttttgttctatggctccgcaggcgccgagcaggacatgtcg
gaagcgtgcgctcagctacgctttggggacgacatggtggctgagggcgaggtgtccggg
ggtgtcatcggccccgaaaccgctgctcttggcggtcgcggtgttgctggcggaggtggc
cgcgctgcggtagcgggcagagcagccgccatggtggccgccgcagctgccacggcaggg
gtgactgcagtgacggcatggcggcggccgtcggcggctctggcgccaggagcgcctgct
gccgtcatggctcgcggagaagaactcctttcagcggctgacggcgtcgccggtggcgga
ggcttcggcggggccatcgcgtcttcgccaatcagtttagctctggcgcgacccgtgaca
agtcggcccatggcggccatgaccgatttcgcagcagctgcggtgctaccccttcgggaa
gtccgtaccgctggcaacctcactgatgcgggcctggccatgggcaggagcttccgagtg
ggctggggcccggaggggaggcttgtcgtgccaggagcagctgatgctgcgacagcgacg
gagatttgcgttacgcgagtgcgtgtggagggtgaaggtgcagcgtacggcgaggcgtcg
tatggttccggtgccatcagtgctggctcagaggaggcggaggcgctggaggcgctccga
gaccggctgcgcgctggactggaagttcatctggctgcgagtcagccgcaaaaggctgct
gccgattgcgataatcaggacgcggccgccagtggcgactcaatcgtgccgcactggcgt
cttgctgtcgactcgcgtgagctaacggtgcttgtcgagcggcacgtgcgtgtgtgtgaa
aagcagctgcagcagctgacgggcggcagtggtgctagtggcggggctgacggcgctgga
cgcagcggctgcggcggggctgccgtcgatggtgacgtcgatcatccagacgcgcggcgg
ctgcgccacgagatcgagacctggcggcttgtggaaacgctctttgccaaaattgacggt
gaagttccttcagatggcaccgccggtgacgaggccgagcaggggtcgccgccaggtgcg
acgcaggtgccactgcggctgacaaccggctcgccgctggttcccgccagccgtggcgcc
ggcgacatgatggtcctgtcgacaccaccgtcgaagtctctgccctctgcgtcggcaaaa
gatgctgcggtattgccgcctgagtacgaaatgaatgatgaaggcgacggcgaagcaagt
gacgttgaagctggcgaagctggcggcggcggcgatgcttcacgtctgtcgtctcagcgt
ccgatgccttcgccgacactgctggcggctcaccagcgccgtgcgcagctgagtctgtgg
ctacagcgtcaggcgcgacgacgagtcgaggaggacctgctaactgctagcagctgtgct
gcggttgtgctgcagctcttggcggggcaccaactgggggcggcggtgggagcggcggtg
gcgggaggtgacccgcggttagccatgctcattgcacgcctgatggtttggcagcagtcg
ggcttcctggagcacatggttccggagcggctggctgcgtatcagctgctgtcaggggag
gtgctggagccgcagcgcctgatgtcgctggactggaggcggctgctcgggctttacctc
tggtacggcaccccaaacaccaagtcgccagtcaccgccgtgaaccagtacatgatggac
cgccatgccgagcccagtatcgtgccacaccccgcaccgtaccatgtggaagggctgcag
ccatcagctaccggcgccgtcgccggcagtagcgctgccacgtcgggatcaaccgacgtg
caatgggagctgctacagctgtgggcaacgacaccggcggcggcgacggcggactgtctg
gcatcgggacaggaggcgacggcgacgggtgtggcggccgcggcggcgcgtgcgttaggg
gcctggcttgccggtggcggctgtagcaggctgttgcggtgctcgggatatagtcctaat
ccgctggaccacagcttggcctggtacttgatgacggcgctgcaggcagccggggttttg
cccaggccgcgaaccctcggaggcattgacgacggccacggcgcgtctgccgcagcgtac
gacaacgagatgcttaccaccactctggagttcatttcccagctgcagctcgcgggcggt
ttgtgcgagtgggcggtgtttgtggcgctgaccatccctgacctggaggagggcggtccc
gccgttcggcagcgggtggtgcaggagcttctggcgctgacagtgcccgagtgggcgggt
gacagctcccgagagctgttcctcgaggggactctctccgttccggaacagttgctggcg
aaagcgcgcgccacgtgggcgcagtacacgcgcgacgatgacgcgcgatgtgcagcgctg
ctggcggccggtgatgccgccgctgcacatgacgtctttgtctcgtctgtcgcgccggcg
ctcttcctgtccggcgcttgggacgagcttgcgcgccttgttgcggacttggagcccgct
gccacggccatcccgtcgtggtcgactggcggcggcctgtatggcggctatttggcgatc
tttggccgtcaactagtggcggcgacggtggcggcggcagggtccgttggcagcggtggc
ggcgccgccccagcaatgcctgagggtgtgactctggaggcgcttattgagttcgcaatg
cacgtccaggaggcccagatggcattgaacgctgctggtagcggcgatatggttgctgct
gggggttgtgttggcggcgcggcgacaccgcaggctcttgacgagacagctgagcggtca
aggctgcggcggcggctagtgctgagccgcatttctgcgcgcttgcacggggccctcatg
tcggtttcggcgacagctgtggcggtgcaggcggatggcggtaccagcggccccgccgct
gatttggaggcccgttgcgcggggctgcagtccgccctggctctgcagggctgcctggta
gcggagttgcaactgggcggggtagcggtggctgtggcggaagcaggcgcaagggtagcc
tgctcgtcgtag

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