Volvox carteri f. nagariensis: VOLCADRAFT_94425
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Entry
VOLCADRAFT_94425 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_94425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_94425
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_94425
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VOLCADRAFT_94425
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
VOLCADRAFT_94425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
ExsD_C
Motif
Other DBs
NCBI-GeneID:
9616178
NCBI-ProteinID:
XP_002953614
JGI:
94425
UniProt:
D8U4S0
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MLTSGRRASCFEPCACTRNYSFQDESLLFYGSAGAEQDMSEACAQLRFGDDMVAEGEVSG
GVIGPETAALGGRGVAGGGGRAAVAGRAAAMVAAAAATAGVTAVTAWRRPSAALAPGAPA
AVMARGEELLSAADGVAGGGGFGGAIASSPISLALARPVTSRPMAAMTDFAAAAVLPLRE
VRTAGNLTDAGLAMGRSFRVGWGPEGRLVVPGAADAATATEICVTRVRVEGEGAAYGEAS
YGSGAISAGSEEAEALEALRDRLRAGLEVHLAASQPQKAAADCDNQDAAASGDSIVPHWR
LAVDSRELTVLVERHVRVCEKQLQQLTGGSGASGGADGAGRSGCGGAAVDGDVDHPDARR
LRHEIETWRLVETLFAKIDGEVPSDGTAGDEAEQGSPPGATQVPLRLTTGSPLVPASRGA
GDMMVLSTPPSKSLPSASAKDAAVLPPEYEMNDEGDGEASDVEAGEAGGGGDASRLSSQR
PMPSPTLLAAHQRRAQLSLWLQRQARRRVEEDLLTASSCAAVVLQLLAGHQLGAAVGAAV
AGGDPRLAMLIARLMVWQQSGFLEHMVPERLAAYQLLSGEVLEPQRLMSLDWRRLLGLYL
WYGTPNTKSPVTAVNQYMMDRHAEPSIVPHPAPYHVEGLQPSATGAVAGSSAATSGSTDV
QWELLQLWATTPAAATADCLASGQEATATGVAAAAARALGAWLAGGGCSRLLRCSGYSPN
PLDHSLAWYLMTALQAAGVLPRPRTLGGIDDGHGASAAAYDNEMLTTTLEFISQLQLAGG
LCEWAVFVALTIPDLEEGGPAVRQRVVQELLALTVPEWAGDSSRELFLEGTLSVPEQLLA
KARATWAQYTRDDDARCAALLAAGDAAAAHDVFVSSVAPALFLSGAWDELARLVADLEPA
ATAIPSWSTGGGLYGGYLAIFGRQLVAATVAAAGSVGSGGGAAPAMPEGVTLEALIEFAM
HVQEAQMALNAAGSGDMVAAGGCVGGAATPQALDETAERSRLRRRLVLSRISARLHGALM
SVSATAVAVQADGGTSGPAADLEARCAGLQSALALQGCLVAELQLGGVAVAVAEAGARVA
CSS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgctcacttctgggcgacgcgcatcgtgctttgagccatgcgcttgcacacgcaactac
agtttccaggatgaaagtcttttgttctatggctccgcaggcgccgagcaggacatgtcg
gaagcgtgcgctcagctacgctttggggacgacatggtggctgagggcgaggtgtccggg
ggtgtcatcggccccgaaaccgctgctcttggcggtcgcggtgttgctggcggaggtggc
cgcgctgcggtagcgggcagagcagccgccatggtggccgccgcagctgccacggcaggg
gtgactgcagtgacggcatggcggcggccgtcggcggctctggcgccaggagcgcctgct
gccgtcatggctcgcggagaagaactcctttcagcggctgacggcgtcgccggtggcgga
ggcttcggcggggccatcgcgtcttcgccaatcagtttagctctggcgcgacccgtgaca
agtcggcccatggcggccatgaccgatttcgcagcagctgcggtgctaccccttcgggaa
gtccgtaccgctggcaacctcactgatgcgggcctggccatgggcaggagcttccgagtg
ggctggggcccggaggggaggcttgtcgtgccaggagcagctgatgctgcgacagcgacg
gagatttgcgttacgcgagtgcgtgtggagggtgaaggtgcagcgtacggcgaggcgtcg
tatggttccggtgccatcagtgctggctcagaggaggcggaggcgctggaggcgctccga
gaccggctgcgcgctggactggaagttcatctggctgcgagtcagccgcaaaaggctgct
gccgattgcgataatcaggacgcggccgccagtggcgactcaatcgtgccgcactggcgt
cttgctgtcgactcgcgtgagctaacggtgcttgtcgagcggcacgtgcgtgtgtgtgaa
aagcagctgcagcagctgacgggcggcagtggtgctagtggcggggctgacggcgctgga
cgcagcggctgcggcggggctgccgtcgatggtgacgtcgatcatccagacgcgcggcgg
ctgcgccacgagatcgagacctggcggcttgtggaaacgctctttgccaaaattgacggt
gaagttccttcagatggcaccgccggtgacgaggccgagcaggggtcgccgccaggtgcg
acgcaggtgccactgcggctgacaaccggctcgccgctggttcccgccagccgtggcgcc
ggcgacatgatggtcctgtcgacaccaccgtcgaagtctctgccctctgcgtcggcaaaa
gatgctgcggtattgccgcctgagtacgaaatgaatgatgaaggcgacggcgaagcaagt
gacgttgaagctggcgaagctggcggcggcggcgatgcttcacgtctgtcgtctcagcgt
ccgatgccttcgccgacactgctggcggctcaccagcgccgtgcgcagctgagtctgtgg
ctacagcgtcaggcgcgacgacgagtcgaggaggacctgctaactgctagcagctgtgct
gcggttgtgctgcagctcttggcggggcaccaactgggggcggcggtgggagcggcggtg
gcgggaggtgacccgcggttagccatgctcattgcacgcctgatggtttggcagcagtcg
ggcttcctggagcacatggttccggagcggctggctgcgtatcagctgctgtcaggggag
gtgctggagccgcagcgcctgatgtcgctggactggaggcggctgctcgggctttacctc
tggtacggcaccccaaacaccaagtcgccagtcaccgccgtgaaccagtacatgatggac
cgccatgccgagcccagtatcgtgccacaccccgcaccgtaccatgtggaagggctgcag
ccatcagctaccggcgccgtcgccggcagtagcgctgccacgtcgggatcaaccgacgtg
caatgggagctgctacagctgtgggcaacgacaccggcggcggcgacggcggactgtctg
gcatcgggacaggaggcgacggcgacgggtgtggcggccgcggcggcgcgtgcgttaggg
gcctggcttgccggtggcggctgtagcaggctgttgcggtgctcgggatatagtcctaat
ccgctggaccacagcttggcctggtacttgatgacggcgctgcaggcagccggggttttg
cccaggccgcgaaccctcggaggcattgacgacggccacggcgcgtctgccgcagcgtac
gacaacgagatgcttaccaccactctggagttcatttcccagctgcagctcgcgggcggt
ttgtgcgagtgggcggtgtttgtggcgctgaccatccctgacctggaggagggcggtccc
gccgttcggcagcgggtggtgcaggagcttctggcgctgacagtgcccgagtgggcgggt
gacagctcccgagagctgttcctcgaggggactctctccgttccggaacagttgctggcg
aaagcgcgcgccacgtgggcgcagtacacgcgcgacgatgacgcgcgatgtgcagcgctg
ctggcggccggtgatgccgccgctgcacatgacgtctttgtctcgtctgtcgcgccggcg
ctcttcctgtccggcgcttgggacgagcttgcgcgccttgttgcggacttggagcccgct
gccacggccatcccgtcgtggtcgactggcggcggcctgtatggcggctatttggcgatc
tttggccgtcaactagtggcggcgacggtggcggcggcagggtccgttggcagcggtggc
ggcgccgccccagcaatgcctgagggtgtgactctggaggcgcttattgagttcgcaatg
cacgtccaggaggcccagatggcattgaacgctgctggtagcggcgatatggttgctgct
gggggttgtgttggcggcgcggcgacaccgcaggctcttgacgagacagctgagcggtca
aggctgcggcggcggctagtgctgagccgcatttctgcgcgcttgcacggggccctcatg
tcggtttcggcgacagctgtggcggtgcaggcggatggcggtaccagcggccccgccgct
gatttggaggcccgttgcgcggggctgcagtccgccctggctctgcagggctgcctggta
gcggagttgcaactgggcggggtagcggtggctgtggcggaagcaggcgcaagggtagcc
tgctcgtcgtag
DBGET
integrated database retrieval system