Volvox carteri f. nagariensis: VOLCADRAFT_94705
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Entry
VOLCADRAFT_94705 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03430
Mismatch repair
vcn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VOLCADRAFT_94705
03460 Fanconi anemia pathway
VOLCADRAFT_94705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_94705
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
VOLCADRAFT_94705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9616990
NCBI-ProteinID:
XP_002953977
JGI:
94705
UniProt:
D8U5I5
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
METSSAAWPFPVAPPVIRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGATQISVLV
KEGGNKLLQITDNGCGVRKEDLPILCHRHTTSKLREYEDLETISTLGFRGEALCSISFVS
HMTVTTMARGAQYGYRVTYKDSEMEPPGPRPVASVPGTTITVEDLFYNVPTRRKALKSAN
EEYGLILDVVGRYAVYSTGVAFSCRRQGDSRPDISTTATGSRVDAVRSVYGVEVARELLS
LKVAVGSGTGPDVPVDGPMGLSVEGLISGANYSTGKKTVLVLFINGRCVECSPLRRALEG
LYGALLPKASRPWIFLDVRLPPRQVEVNMHPTKREVGFMHQAEVIEAIRQAVEAKLLASN
ESRTFATSATLQTQLPFASLPLTQRQSLPAPGRSILVEGGDGELTGELGGEGDADGEGVD
DVEEGGPTGEKEEQEGGGGSGRKQLRGKAAAAQTPGTRVQQGSGGLDLKRPPSGTEPLPY
RPEKLVRVDYRSGTLDTFVISKTAADGGAAFVDAARAVAAGGSVARKRSAAARLAPGAGN
PLGGLLADASSGEAQQQQHPESQLRPARAAPPALVTAEVLGVGPFVGGDQGGGRPQDGDP
PAAGRVPPRRAPPPLVTADPAVLELWSEVESEAHSGLGELLREHTFVGMADGSLALLQHG
TRLYLVDVGTLSRDMFYQLALRRWEQPLKLDLEPPPLVSELVALGLRILEVKGEWQPEDG
SPEELGELVTELLRQNGPALEMQLGLVVDQQGSHCCGYLLRFLSRPMPQVQALADLYAAR
PPLLAEAATGSGVSGDPPSSSPASKEPDAVASHLQSGPAGSNSRGQASSSHEGRGSQDVL
HADPGSRSGREAGVDGHLEDVGRDNCVGPVSRSGKPGFDNCVRGLRHPQEGVGVVQEDIV
IAGVEQCRGAIAEDRDSPSGEGHGATRTQRAAPAVQSKPTADGGELQQGSERALAVYEYK
IKHAILPALRGCLKPPRGRATDGSCVQIAALERLYRIFERC
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagctcggcagcatggccattcccggtggccccgcccgtgattcgcaagctt
gatgaaaacgtcgtcaacaagatcgcagcaggagaggttatccaaagacccgcctcagca
ctgaaagaaatgctagagaactcgctcgacgcaggcgccacccagattagcgtcctggtg
aaagagggcggcaacaagctcctccaaatcactgataatggatgtggtgtgcggaaagag
gacctgcctatcctgtgccaccgccacaccacctccaagctgcgagagtatgaggacttg
gagactatctccacgttgggcttccggggggaggcgctgtgctccatcagcttcgtatcg
cacatgactgtgacgaccatggcccgaggcgcgcaatacggctatagggttacgtataag
gacagcgagatggagccccctgggccccgacctgtggcctcagtcccgggcaccaccatc
accgtagaggacctcttttacaacgtacccacgcggagaaaggccctcaaatcggctaac
gaggagtatggattaattctggacgtggtggggcgttacgctgtgtacagcacgggtgtg
gccttcagttgccgccggcagggcgactcccgacccgacatctcgaccaccgccaccggc
tccagggtggatgccgtacgttccgtgtacggtgttgaggtagcacgtgagctgctgtcg
ctcaaggtggcggtcgggtccggcacgggacccgatgtgccggtagacggacccatgggt
ctcagtgttgagggcctcatttccggtgccaactacagcaccggcaagaagacggtgctg
gtgctcttcatcaacgggcgctgtgtggagtgtagccctctgcggcgggcgctggagggg
ctctacggggccctgctgcctaaggcctcgcgaccctggatcttcctggacgtgcggctg
cctccgcgtcaggtggaagttaatatgcaccccaccaagcgggaggtgggcttcatgcac
caggctgaggtcattgaggcgatccggcaggcggtggaggcgaagctgcttgcatccaat
gaatcccgcaccttcgctacctcggccacgctgcagacgcagctgccctttgcatcgctg
ccgctcacgcagcgccagtcgctgcctgcgccgggtcgcagcatcttggtggaagggggc
gacggggagctgacaggcgagctgggcggcgaaggcgatgctgatggagagggtgtggac
gatgttgaagaaggcggtcctacaggagagaaggaagagcaggaggggggaggtggcagt
gggcgaaagcagctccgggggaaagcagccgctgcccagacgccggggacaagggtgcag
cagggcagcgggggcctggatctaaagcggccgccctcgggaacagagcctttgccgtac
cggccagaaaagcttgtgcgcgtggattacaggtccggtacgcttgacacctttgtcatc
tccaagactgctgcggatggtggcgccgcctttgttgacgccgcacgtgctgtagcggcc
gggggcagcgtggcccgcaagcgctccgcagcagcacgcctggctccgggtgcgggaaac
cccttgggcggcttacttgcggatgcctctagcggcgaggcgcagcagcagcaacacccg
gagtcgcagttgcgaccggcccgggctgcgcctcccgcgctggtcacggctgaggtgctg
ggagttgggcccttcgtgggcggggatcaaggcggaggacgcccacaggacggcgacccg
ccagctgcgggccgagtgccaccacggcgggccccgccgccgctggtgaccgcagatccg
gctgttttggagctttggtccgaggtggagtctgaggcgcactcggggctgggggagctg
ctgcgggagcacacctttgtggggatggccgatggcagcctggcgctgctccagcacggc
acccggctctacctggtggacgtggggaccctgagccgggacatgttctatcagcttgct
ctcagaagatgggaacagcctctgaagctggatctggagcccccaccgcttgtctcggag
ctggtggcgctgggactgcggatactggaggtcaagggcgagtggcagcccgaggacggc
tctcccgaggagctgggtgagctggtgacggagctgctgcggcagaacggtcctgcgctg
gagatgcagctgggcctggtggtagaccagcaaggcagccattgttgtggctatcttttg
cggtttctgagccggcctatgccccaagtacaggcattggccgacctgtacgctgctcgt
cccccactgctggcggaagccgctaccggttctggcgtttctggtgacccaccctcgtcg
tctccggcgtcgaaggagccggacgcagtagccagtcaccttcagagcgggccagcgggg
tcaaacagccgaggccaagcgtctagctcccatgaggggcgtggttcgcaagacgtcttg
cacgctgaccctgggtcgagatcgggtagggaagctggcgttgatggccacttagaagat
gttggccgtgacaattgcgtagggccagtgagcagaagcgggaagcctggtttcgacaac
tgcgttaggggcttgcgacatccccaggaaggggttggagtcgtgcaagaagatattgtc
attgcaggggtggagcagtgcaggggagcgattgcagaagacagggacagcccgtcgggc
gaagggcatggcgctacacggacgcagagggccgcgccggcagttcagtcgaagccgaca
gcagatgggggggagctgcagcagggaagtgagcgagcattggctgtttatgaatataag
attaagcacgctatcctgccggccctaaggggctgtttaaaacctccgcgcggacgagcc
acggatggcagctgcgtgcaaattgcggcgctggagcgcctttatcgcattttcgagcgc
tgctga
DBGET
integrated database retrieval system