KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_95258
Entry
VOLCADRAFT_95258  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14304  nuclear pore complex protein Nup85
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VOLCADRAFT_95258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_95258
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_95258
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VOLCADRAFT_95258
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    VOLCADRAFT_95258
SSDB
Motif
Pfam: Nucleopor_Nup85
Other DBs
NCBI-GeneID: 9624455
NCBI-ProteinID: XP_002954454
JGI: 95258
UniProt: D8U711
LinkDB
Position
Unknown
AA seq 831 aa
MSGGEPTLEVPVSRGSRLHFSWGLGSELRLLDIQNPNTEQGGNAGSATRVCWGQANSNSR
AISFGTAEQYAEVQRSRLSGARDDAHLARVASYARTIREQLMGAREEIQSDGGQSHLEVA
LWHLMEIFFVDAPRHEGNLGEASACGYDFVQWLASHSEVLEVVSERVPLAKRLQDVVSSP
SPDTHPGYWGVLRRLAALGRISEAMELLDCHEVRRAVTGGGQRGGGAAAAAALQQPGVRA
QVELTDCLFVLLKRLPRLAPSSGCRDPRAHSSLADFAAARAVWLREVQDIAGSEGLFAAA
GAASRRTAEGVRSVLAILLGQPTALRAATRDWLELAAAEVVHRQAGGVVAANQLKALLAE
CQAAVAAARREGEGEGGSGGGGDSSGLLNWLAGLLEALTEMDIAGVVSELTTSGLGLGWL
LAHSLELMAAYPAGGGGGGGGGAARAGGGGGGVLTQRLAVSGCDQMEYFRLAWADSLLPN
CMSGGWQLVLQYLAWCPQHGAAAVEALMEALPVDSRDVRTLEKALAACRRLGLGGSAAVL
CRMAGVDALSRGHLGSGVQWMVRAGDTRRTAAALQLVGVAVEEALLARLGIYQAGALALP
GGGELEALLEWLPVVGGEAGGGGGEEAAGGGGGGGGGGRGLTSFLGDVLRLSQAMGALAA
ARDSGAPPDDPATLGSLAAGHAAFMSMVRRRTPPRRLCLPLLFYAIPLLEASAGGGRLFS
TDDVQLLRQWASDCARGAVATSIGTAAGSGGSGGTGGPMGALAAMLRVHDRYARDVQLAL
VRATARSHVLQYSGGGSGCGGALGGLGGSGGVGAAAAGGGGGGGAALMLPS
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgagcggcggcgagccaacgcttgaagtacccgtctctcgcggttcacgcctccatttc
tcatggggacttggctctgagttacgccttctggatatccaaaatccaaacactgagcag
ggaggcaacgccggctctgcgacgcgagtctgttggggccaggcgaacagcaacagccgt
gctatctcctttggaactgccgagcagtatgcagaggtacagcgctctcgtctctcaggc
gcgcgagatgatgcccatttggcgcgcgtggcgtcgtacgctcgtactatacgagaacag
ctgatgggtgcacgggaggaaattcagtcggacggcgggcagagccacctggaggtcgcg
ctgtggcacttgatggagatctttttcgtggacgcgcctcgccatgagggcaacctgggg
gaggcgagtgcgtgtggctacgactttgtccaatggcttgcgtcacattccgaagttctg
gaggtggtttcggagcgggttcccctggccaagcggctgcaggacgtggtttcctcccct
tcccccgacacccaccccggctactggggcgtgcttcgccgcctggcggcactgggtcgc
atctccgaggccatggaactgttggactgccatgaagtgcggagagcggtgacgggaggg
gggcagagaggcgggggggccgcggcggcggcggcgctgcagcagcccggtgtgcgggcg
caggttgagctcacggattgtttgttcgtgttgttgaagcggctgccccgcctggccccc
tcgtccggctgccgggacccccgggcgcattcctctctggcggacttcgcggccgcgcgg
gcggtgtggctgcgggaggttcaggacattgcgggctcggaggggctgttcgcggcggcg
ggggcggcgagccggcgcacggcggagggcgtacggtccgtactggcgattctgttgggt
cagccaactgccctccgagccgcaactcgcgactggttggagctggcggcggcggaggtc
gtacatcgccaggcggggggtgtggtggcggcgaaccagctgaaggcgctgttggcggaa
tgccaggcggccgtggcggcggctcgacgggagggggagggggaaggcgggagtgggggt
gggggggacagcagcgggctgctgaattggctggcggggctgttggaggccctgactgaa
atggacattgctggtgtggtttcggagctcaccaccagcggtctgggattgggctggctg
ttggctcactcgctggagctgatggcggcctacccggccgggggaggaggaggaggagga
gggggggcggctcgggctggaggcggtggcggcggagtgctaactcagcgcctggctgtt
tcaggatgcgaccagatggagtactttcgtttggcctgggcggattccctgctacccaac
tgtatgagtggcggttggcagttggtgttgcagtacctagcgtggtgcccgcagcacggc
gcagcggcggtggaggcgctcatggaggcgctgccggttgacagtcgggatgttcgtaca
ttggaaaaggcactggctgcgtgtcggcgtttgggactgggtggttcggcggccgtgttg
tgtcgtatggcgggtgtggacgctctcagtcggggccacctgggcagcggagtgcagtgg
atggttcgtgcaggtgacacccgccgtacagccgccgcgctgcagctggtcggggttgcg
gtggaggaggctctgctggcgcgactcggtatctaccaggcgggggccttggcgctgccg
gggggcggcgagctggaggcgttgctggagtggctgcccgtggttggaggggaagcgggc
ggcgggggaggagaggaggcggcaggaggaggaggaggagggggaggagggggtcgcggg
ctgacgtcattcctaggggatgtgctgcggctcagtcaggcgatgggagcacttgcggcg
gctcgagactcgggggcgccgcccgacgaccccgctacccttgggtcactcgcggccggc
cacgccgccttcatgtccatggtccgccgccgtacaccgccgcggcgcctctgcttgccg
ctgctcttctacgccatcccgcttctggaagcttccgccggtggcggccgcctcttcagt
acggatgacgtacagctgctgcggcaatgggccagcgactgcgcgcgcggcgccgtcgcc
acaagcattggcacggccgccggcagcggcggtagcggcggcaccggtggacccatgggc
gccctggcggcgatgctaagggttcacgaccgctacgcgagggacgtacagctggcgctt
gtacgggcgacggcacgttcccacgtgctgcagtacagtggtggcggaagcggttgcggc
ggcgctttgggcggtttgggtggcagcggcggtgttggcgccgccgctgcaggtggcggc
ggcggcggcggtgcagctctgatgctgccgtcgtga

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