Volvox carteri f. nagariensis: VOLCADRAFT_95362
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Entry
VOLCADRAFT_95362 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
VOLCADRAFT_95362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_95362
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
VOLCADRAFT_95362
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
VOLCADRAFT_95362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
9624848
NCBI-ProteinID:
XP_002954488
JGI:
95362
UniProt:
D8U790
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MALRGQGSLQLLLGKSVFGAKKRKAGKEEPNTATKRQQTFAEQLDLPAPPDGSGWLRIEA
AVVGLRFRRASSAAAVAAVAATAVPSHPSAAAAAADSTVHRMNSWPPVQGHQYRLVPEPT
NPQDVNAVQVLLCTTTAGSSSGGPSATPPAAANGAAHLGPLLRAGQLETQAYSPLAGGQS
LEPVYVWRNEHSMGYTREGHHTAMASPGYPINDDCGNYFLCHLPASARLRGCGVGAEAAD
SRDADGGQKSGDVAGLRGGTAGGGGAAGPREGSGADGATAATEAALEAAVAAAAAWRLAR
SSPNTAAGEVLRSNFATMAADVRRHDGHLLTSLELGLLDRLQGLPPPAQCLFLRLLLRRG
PWFTLRGITYLECGDVAVAAEALVAAELAVRPQPEDWPQVAELLPVAERVQRPTGCRMRM
VVQAPVTPVPASAGAMAPLAVAADCAAEVVEAMVGPCIRLSPPSLELLARMQRLYFLAEG
PAADLGRFLATERGVIRYPTYTINRSSSAFTCRQQLLEYEQALDHAAQLESCLEAGDDAG
VAAALAPALAAVRAGAHRLVRWRGDATIPVRAVPGPWPWEAAPTAGCAAADVKDGSMACP
TGAASGDDGGMSDGAGGPQVRGSAEPQAPAGMSSGTALTAVAKASCTCHSDGSFAENRSA
GGGDSGMRRGDDPWVGGEGQCLRCGGGKRAPPPPPSGAGCGVLESVDLTYSSDDEGGGDG
VEMENGGDTVTPAAAVMSTGPCRRGAAAAVAVGAVVAKAVAAAAMEAAASVKPAAQGKEE
VAALGLRTEHVVQQAMQGHFPVVQVAGYADGRRVGACQKQPPLGEVGGQTPEEANRDVGT
VIDVGVDVGVNLSVGHDGGGVAGILQPAGGGGEDDIMYGDEYDILYTTDCGGVSPGNTAA
ANPNSDACRQQQQQQLDGEVGPRDDAHQVSPDRQEPSSRLDVEPIPGEMQERTQQPQPQP
QPQQFLARFCAAWVYASMTTVGDPPLPSRVGLRVSFLERHRRYGEAVAEAALTDPWVRHG
DRLALQRRVLRLGKPPRRWRRPPWAAAALAEPREVVVSGHMLRGRTGLKSRFLAPSAQSV
AASSAAGTNPPGPAPARPSAVGAAGPAAASPLVTVEQLALLHYCSPAGGGWRGVHSEGGV
WVTMWALLCWDVLFMDVPEVFRNPFQTSPLDLDTDAFLPARRAAVDERLQLIASGGGPEL
LRSVWSRHAGTWCRGVHWGRLPLGELLQIARCVGGLGLSVVCRRLCEDAGGWRGGMPDLL
LWRPERGDAMVSEVKGPRDRLSDQQRAWLAALAAAGVRAEVLRVVEAAPPPRRHADHGAQ
QRDAEGAVDAAVPAAVAVADVAAAAAAAPAAVAALTGDLGGGGARAGRRVLLRGRRAAAA
VPIACEGVAAKRPEDHPAVASFGVGAALAVPAAGASLAAAPCGGISSCGAVDGVVVISDD
GGDADADDH
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggccttgagaggacagggctccctccagttgctccttgggaaatccgttttcggcgcg
aaaaagcgcaaagccggcaaggaggaaccaaacactgcgaccaagcgacagcaaaccttt
gcagagcaactcgatctgcctgcaccacctgatggcagcggctggctccgcatcgaggcc
gccgttgttgggttacggttcagaagggccagctcggccgccgccgtcgctgcggttgca
gccacagcagtaccatcacatcccagtgctgccgccgccgccgccgacagtacggtgcac
cgaatgaacagctggccgcctgttcaaggccatcaatatcgcttggttccggagcccacc
aacccacaagacgtaaatgcagtccaggtcctactctgcaccacaacggctgggagcagc
agcggcgggcccagcgctacgccgcctgccgccgccaatggcgccgcccacctggggcct
cttttgcgggctggacagctcgaaacgcaggcctatagccccctcgcagggggccaaagt
ctggagcctgtgtacgtgtggcggaatgagcactccatgggctacaccagggagggtcat
cacacggccatggcgtctcctggttatcccattaacgatgactgcggaaattacttcctt
tgccatcttccagcaagtgctcggctgcgtggctgtggtgttggagcggaagctgcggac
tccagggacgcagatggcggtcagaagtcaggagacgtggcgggtttgagaggtggtacg
gcaggcggtggcggcgccgcggggccgcgcgagggttccggtgccgacggcgccactgcg
gccacggaggcggcgctggaggcggcagtggcggcagctgccgcgtggaggcttgcccgc
tcgtccccaaacaccgcggcaggggaagtgctgcgtagcaattttgcgacaatggcggct
gatgtcaggcgccacgacggacacttgttgacctccctggagctcggcctgctggacaga
ctgcagggcctaccgccgccagcgcagtgcctgttcctgcgcctgctgctgcgccggggt
ccctggttcaccctccgcggcatcacctacctggagtgcggtgacgtggcggtggcggcg
gaggcgctcgtggcggcggagctggcggtacggccccagcctgaggactggccgcaggtc
gcggagctgttgcccgtggcggagcgggtgcagcgaccgacggggtgcaggatgcggatg
gtagtgcaggcgccggtgacgccggtgccggcaagcgcgggcgccatggcgccgcttgca
gtagccgcggactgtgctgcagaggtagtcgaggcgatggtgggtccctgcattcggctg
tcacccccctccctggagctgttggcccgcatgcagcggctctacttcctggcggagggt
cccgcagccgatctgggcaggttcctagccaccgaacgcggcgtcatccgctaccccacc
tataccatcaaccgctcctcctccgcattcacatgccgccaacagctcttggagtacgag
caggcgttggatcacgcggcgcagctggagagctgcctggaggctggagacgacgccggc
gtggcggcggcgctggcgccggcgctggcggccgtgcgcgctggcgcccaccggctcgtc
cgctggcgcggcgacgccaccattcccgtgcgtgccgtaccgggtccctggccgtgggag
gcggcaccaaccgctggatgtgctgccgctgacgtcaaggacggcagcatggcatgtccg
acgggcgccgcgagtggagatgacggtggcatgagtgatggcgccggcgggccgcaggtg
cgcggctctgccgagccacaggcgcctgcggggatgtcttcagggacggcgttgacagcg
gtggccaaggcgtcgtgcacgtgccatagcgacgggagctttgcggaaaacagaagtgca
ggtggtggcgatagcggtatgcgccgcggcgatgacccgtgggtcggtggtgaaggccag
tgcctccgttgcggcggtggcaagcgggcaccaccaccaccaccttcaggtgcaggctgt
ggggttctggaatccgtggatctgacgtacagcagcgatgacgagggcggcggggatggc
gtggagatggagaacggaggtgatacggttacgcccgcggcggcagtgatgtctacaggt
ccatgtcgccgtggtgctgctgctgccgttgctgttggcgctgttgttgcgaaggcagtg
gcggcagctgcaatggaggccgcggcgtctgtgaagccggcggcgcaaggcaaggaagag
gtggcggctttagggctacgtacggagcatgtagtacagcaggcgatgcagggacacttt
cctgtggtgcaggttgctggctatgctgatggccggcgtgtaggtgcatgccaaaagcaa
cctccgctgggggaggtggggggccagacgccggaagaggccaaccgcgacgtggggacc
gtcattgacgtcggtgtagacgtcggcgtcaacctcagtgtcgggcatgacggcggcggc
gtggcggggatcctgcagcccgccggcggtggcggcgaggatgacatcatgtacggcgac
gagtacgacatcctgtacaccacggactgcgggggtgtttcgcctggcaacactgccgca
gccaatcccaactccgacgcgtgccggcagcagcagcagcagcagctggacggggaggtt
gggccccgggatgacgcccatcaagtgtcaccagatcgccaggagccctcctcgcgttta
gatgtggaacccattcccggtgaaatgcaagagcggacccagcagccgcagccgcagccg
cagccgcagcagttcctggcgcgattctgcgcggcgtgggtgtatgcgagcatgaccact
gtcggtgacccccctttgcccagccgtgttgggttacgtgtgtcctttctggagcgccac
cggcggtacggcgaggcggttgccgaggcggccttgacggacccatgggtccgtcacggc
gaccgtctggcgctccaacgccgagttctacggctgggtaagccgccgcggaggtggcgg
cggccgccctgggcggcggcggcgctggcggagccccgagaagtggtggtgtcgggacac
atgctgcgtggtcgcaccggtctcaagagtcgcttcctggcaccatccgcccagagcgtc
gctgcaagctctgccgctggcacgaaccccccgggccctgcccccgcccgcccttctgcc
gttggtgctgccggccccgctgctgcttcccccttggtgaccgtggagcagctggcgttg
ctgcactactgcagtcccgcgggcggcggctggcggggtgtgcacagcgaggggggcgtg
tgggtgacgatgtgggcgctgctgtgctgggacgtgctgttcatggacgtgcctgaggtg
ttcaggaaccccttccaaacctcccccttggatttggacacggacgcgttcctgcccgcc
cgccgcgcggcggtggacgagcgtctgcagttgattgcctccggtggcggccccgagctg
ctccgctccgtgtggtcccgtcacgcgggcacctggtgccggggggtgcactgggggagg
ctgccgctgggggagctgctgcagattgctaggtgcgttggcgggctgggtctgtcggtg
gtatgccgccggctgtgcgaggacgcgggcggctggcggggcggcatgccggacctgttg
ctgtggagaccggagaggggggacgcaatggtgtcggaggtcaagggcccacgggaccga
ttgagtgatcagcagcgcgcgtggttggcagcactggcggcggcgggtgtacgggcggag
gtactgcgggtggtggaggcggcgccgccgccacggcgacatgcggatcatggagcgcag
cagcgtgacgccgaaggtgctgttgatgctgccgttcccgctgctgttgctgttgctgac
gtggcggcggcggcggcggcagcaccagcagcagtagcagctctaacgggcgacctcgga
ggtgggggtgcgagggctggacggcgggtgctgcttcggggacgcagggccgcggcggcg
gtgccaattgcctgtgaaggtgtggcggcgaagcgacctgaggatcacccggcagtggcg
agcttcggcgttggagcggccttggctgtgccggcggcgggggcttcgctggcggcagca
ccctgcggcggcataagtagttgcggtgctgtggatggggtagtcgtaatcagcgatgat
ggtggtgacgctgatgctgatgaccactga
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