Volvox carteri f. nagariensis: VOLCADRAFT_95631
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Entry
VOLCADRAFT_95631 CDS
T01330
Symbol
vop5
Name
(RefSeq) volvoxopsin-5, sensory rhodopsin with histidine kinase domain
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
Response_reg
Bac_rhodopsin
HisKA
Guanylate_cyc
HATPase_c_3
HATPase_c_2
EAD9
HATPase_c_5
FlxA
DUF6768
Motif
Other DBs
NCBI-GeneID:
9621525
NCBI-ProteinID:
XP_002954798
JGI:
95631
UniProt:
D8U7U1
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MGGGGKASTLPAHLQDRIDAIETNQRDTDAQAFQKAVERRARVSFSVAIAGFGVLMFLLS
AYLLCTSGIGDPELTAEFHSKTDPNCYTWPMVAFSTAFGLNFITLLFERESAKFQLALLA
CYINFLAGFNDYLSWRGYSPIVRDSWGQGFQLLRTVMWLLTTPAMVYLLSIISDFSRIKV
YSVMLADVLMISFGILAFLAFNKYLSILLYLVAWVFFSYVVYSMWTMFHASIAEARHDSS
RVSLEVLRLFAVGLWFTFPGIWIIVKLGLVDVHTEEWMWCACDFLGKVMFSSSLLHGNFL
TIEQRRLIAMRIVEEGNRIQVIQELKDLVEQKERFMSSMSHELRTPLNGIIGLSDALLVG
SCGEINDQALKTITTIKTSGARLLNLINDILDAASMRKGKLTIKHEKVNLKRVVDDVIDL
CQPLAKRGVKLVNDLRENVPFVLGDTGRIIQVFHNLIGNSCKFTHNGFISIAASVKDDEV
EVAVSDTGIGIPEDKFDQIFLAFEQVDMSVTRKYGGTGLGLNLVKQLVEAHGGRISVKSK
EGQGTTFFFTLKIHSSAEHPNEGQPQGTPTEAVAGPAEHSQLAAIRGTAAAPGGGGGHGH
GPPRRAPSRRGSFTDKMLGAKKTPSEAGKSSLAPGGQNAGAHGQPGGAARAAAAAAAAPS
ASPQSGEGHGGPAGGAGGIPGGSDAAAAATAATGVPGSGAGVVRRVSRETGGPGGGGAPA
AGRSVTAGPQVSGPMSLNDAAALMKGALKRRSSFREKGDKVRVLSVDDDPVNQLVIQNLL
APVGYEILQAMDGQEALQVLKSEERLPDVILLDVMMPGMSGYEVCRKLREMYPLSCIPVI
MISAKSKEEHIVEGLAAGSNDYVEILARIAAHLRFRDTVYQAGEMAGALPGEVLPGRLLL
KGGTGGALDLAPFLTGPARFTSLPARIARGIESGTTSTTMQMFDQLTLLQVGIPNLATLL
ANVPASELLVALAALFHDLDTLLEQHGCYLLEGLDEQMTIVSGLDNVGDQVLHALGLARS
LLAAADTTALGSKKLKLCISIGIHTGPAQANAGFLVDIASVSPEAKDSGSFVSAGVAMPA
IASANGGRPAAAGGADGGGGGGGGGDAAAAAAAAAEIAKLKKDYESLEKQLEEVSNEAAR
LQPYGCMCRVPLYDLDYTVGCESRGSKPKHSARVGSTQHKSVSELECQLEEAARERGGLE
AALAEMEQRLVATHAALASANHERPGAQSLLLLVQDYY
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggggcggaaaggcctcgacccttccggctcatttacaggacagaatcgatgcc
attgagaccaaccaacgagatacggatgcacaggcattccaaaaagccgtggagaggcgc
gcacgcgtgtcgttctcggtggccattgccgggtttggcgtgctcatgttcctcttatcc
gcctacctgctttgcacgagcggcattggagatcctgagcttactgcagagtttcattca
aagactgatcctaactgttacacctggccgatggtagccttttcgacagcctttggtctc
aactttataactctcctcttcgaacgtgagagcgccaaattccagctggccctgctcgcc
tgctacatcaacttccttgccggtttcaacgactatctgtcatggcgcggttactctccg
atcgtgcgcgactcatggggccagggtttccagctgctgcgcacggttatgtggttgctc
accacaccagcaatggtttacctcctcagcatcatttcggacttcagccgcatcaaggtg
tactcggtaatgttggccgacgtgttgatgatctccttcggtattctggccttcctggcg
ttcaacaaatatctctccatcctgctctacctcgtcgcgtgggttttcttctcctacgtc
gtctacagcatgtggaccatgttccatgcgtctatagctgaagccagacacgacagcagc
cgagttagtcttgaggttctgcggctgtttgctgtgggcctgtggttcactttccccggc
atatggatcatcgtcaaactcggattggtggacgtgcatacggaggagtggatgtggtgc
gcgtgcgacttcctgggcaaggtcatgttcagctcctcgctgttacacggcaacttcctc
accattgagcagcgccgtctcatcgccatgcgtatcgtggaggaagggaacaggattcag
gtcattcaggagctcaaggacctcgtggagcagaaggagcggttcatgtcctccatgagc
cacgagctgcgcacccccctcaacggcatcatcgggctgtcggacgcgctgttggtgggg
tcctgcggggagatcaacgaccaggctctgaagaccatcaccaccatcaagacgagcgga
gcccggctgctgaatctcattaacgacatcctggatgcggcatccatgcgcaagggcaag
ctgacgatcaagcatgagaaggtgaacctgaagcgcgtggtggacgacgtgatcgacctg
tgtcagcctctggccaagaggggcgtcaaattggtgaacgacctgagggagaatgtgccc
ttcgtgcttggcgatacgggtcgtatcatccaggtgttccacaacctgatcgggaacagt
tgcaagttcacccacaacggcttcatctccatcgccgccagcgtcaaagatgacgaggtg
gaggtggcggtgtcggatacgggtattggcatacccgaggacaagtttgaccagatcttc
ctggcctttgagcaggtggatatgtccgtaacccgcaagtacggcggtacgggcctgggt
ttgaacctcgtgaagcagctggtggaggcgcacgggggccgtatcagcgtcaaatccaag
gagggtcagggtaccacattcttcttcaccctcaagatccactcgagcgcggagcaccca
aacgaggggcagccacaggggacgccgactgaggctgtggctggccctgcagagcactct
cagttggcagccatccgcggcaccgccgcagcacccgggggcggggggggacacggacac
ggcccgccgcgccgcgccccctcgcgccgcggctccttcacggacaagatgttgggcgcc
aagaagacaccgtcggaggccgggaagagctcactggctcccgggggccagaacgccggg
gcgcacgggcaaccaggcggggcggctcgtgccgcagcagcggcggcggcggcgccttcg
gcttcgccgcagtcgggtgagggccatggcggcccggcgggaggcgcaggcggtatcccg
ggcggctctgacgccgctgcagctgccactgctgctactggggtacccggttccggagcg
ggggtggttcgccgagtgagccgggagaccgggggacctggcggcgggggtgcgccggcg
gctggcaggagtgtgacggcggggcctcaggttagcggccctatgagtctcaacgacgcg
gccgcgctgatgaagggcgccctgaagcggcgcagctcgttccgcgagaagggcgacaag
gtgcgggtgctgtcggtggatgacgacccggtcaaccagctggtcatccagaaccttctc
gctccggtggggtacgagatactgcaggccatggacggtcaggaggcgctccaggtgctg
aagagcgaggaacggcttccggatgtcattttgttggacgtgatgatgcccggcatgagc
gggtacgaggtgtgccgcaagctccgggagatgtaccccctcagctgcattcccgtcatc
atgatatcggccaagtcgaaggaggaacacattgtggaggggctggcggcgggatccaac
gactatgtggagattctggctcgcatcgcggcgcacctgcgtttccgcgacacggtgtac
caggccggggagatggctggggcgctgcccggggaggtgctgccgggtcggctgctgctg
aaggggggcacgggcggggcgctcgacctggcgcccttcctcaccggccccgcacggttc
acctccctgcccgcccgcatagcccggggcattgagtcggggacaacttccacgactatg
cagatgttcgaccagctcacactgctccaagtgggtatccccaacctcgccaccctcctg
gccaacgtgcccgccagcgagctgctggtggccctggcggcgctgttccacgacctggac
acgctgctggaacagcacgggtgctacctgctggagggactggacgagcagatgaccatt
gtcagcggtcttgacaatgtgggtgaccaggtgctccatgcgctgggtctggctcggtcg
ctgctggcggcagcagacaccaccgccctgggcagcaagaagctcaagctctgcatctcc
atcggcatacacacgggcccggcgcaggccaatgcgggcttcctggtggatatcgcctcc
gtctccccggaggctaaggactccgggtccttcgtgtcggcaggagtggccatgcccgca
atcgcctccgcgaacggtggaagaccagccgcagcgggtggggccgacggcggcggtggc
ggtggcggtggaggcgacgccgcggctgctgccgccgccgcggctgagattgccaagcta
aagaaggattacgagtcgttggagaagcagctagaggaagtctcaaatgaggcggcacga
ctgcagccgtatgggtgcatgtgccgtgtgcctctgtatgacttagattacactgtgggc
tgcgagagccgggggtcgaagccgaaacacagcgcaagggtcgggagcacacagcacaag
tcggtttcggagctggagtgtcagttggaggaggcggctcgtgaacgtggcgggctggag
gcggcgttggcggagatggagcagcggcttgttgccactcacgcggcgctggcttctgcc
aaccatgagcgcccaggtgctcagtcactactactactagtccaggactactactag
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