Volvox carteri f. nagariensis: VOLCADRAFT_97335
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Entry
VOLCADRAFT_97335 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K06236
collagen type I alpha
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04518
Integrin signaling
vcn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
VOLCADRAFT_97335
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
VOLCADRAFT_97335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vcn00536
]
VOLCADRAFT_97335
Glycosaminoglycan binding proteins [BR:
vcn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
VOLCADRAFT_97335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
9619435
NCBI-ProteinID:
XP_002956408
JGI:
97335
UniProt:
D8UCH4
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MAAVEEEVLSTEILRLREEYKALASQLPAALRCEKPESLIDYIGCIFNESDAAVAAGIIK
AGSGTVLNNTHDTAAAAAPDGSKTDSDACPTKPDSPTKHLTSEDLSKGLELLEHLREEVL
TSAETVTTASSELGWLGVITSALAGQPDAVALTRCPDCRRTVLACRMPYHRPHCVPAPAP
SVTAKPAAGAPKAPRGGASGSRGSAGAGSGAAAAAGGGGGRSGGGRGGGGRGSGRGPGRP
PGSGKPGGARHMRSLASLSRDLPSASAPWIAAMPDVSAAAAARHVPTKLKKVTFPGSPTA
AVADVAGDCGGLEGEAAVALEAGDDAFAAAASTQPSASDGDDEEEDAAAARGGIGAVGDT
AVNSNGGGNAVTAKAASTWAGAGLGGKSVASAPQTASGLLSRFLGGLTGAFVFPAATRRA
RSSCPNRIKNGVTSSGQPAAAAPAAGGTTQAAACSGAQGPQDRCGGERSSTGWGPAVQPG
CGAGNGAGPGLSSVATGGNGGVASAPAVGCAVGPKEGTGCGARASPAAKRGAQPQSLQQH
ATKRQQQRQASIAAATAIAAAAKSEDVAEGEDMEAAAEAACGGGEGGGGAAAATQQDATV
PSAASKASAPAPPASEPPSSLPQDISTAMEEPANGAFGTDPAAVAAAAAASQRPVGAAAA
SALPHPPSAPPGAGGDADVAGRSTAKYPQSGPPQGTSPVQHYQQQQQRLVGAAAGSQGSS
PGVLLAAGFANRKRPAVQELLRPGSRLRGQMLVTGPRPVGVGAGVPQQRPLPGVASGSGS
NGAAAVMRAQQPAQVSGQGPVLGSGQPMQRSGTGPLPSQTAGSGAMGGVAPPGQRLVGTQ
PPNSKAPGLMPLAAMGGAPGGTMSGALRQSSNGLMPPGMMPTPGSGPGMIPTPGAGPGGI
GPKQASGGGMIPTPGGGASLTPVPGTFMMIATPGPGSNAGPMKPPALMTAPGCAGLPAAA
ATAAAATPALAVPRAFVPGTLLTPAQVQATAQALLQEQHHLQIAAQLQKAQEQLQHAQQL
HQQAPHGSQAQHAQQLQQAQLQLQHAQQLFQAQVQMQLQQRIMAASQAQAQLQQQAQAQA
QAQAQTQQQQQGQPQAVQGHLPQQAQTQSTQQHYTPATQLQQ
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtagaggaagaagtcctatctaccgagattttgaggttacgggaagagtac
aaagcattggcttctcagctcccggctgcgctgcgctgtgaaaagcctgagagcttaatt
gattacatcggctgcatcttcaacgagtcagatgctgccgtggccgctgggatcataaaa
gctggaagcggcactgtgcttaacaacacccacgacacggcagcagctgcagctccggac
ggctccaagaccgattccgacgcttgccccacgaaacccgattcccccaccaagcacctc
acttccgaagacctctcgaagggactcgagttactcgagcacctgcgggaggaggttctg
acctccgcagaaacagttaccaccgccagcagcgagctcggatggctcggggtgatcacc
tcagcccttgcaggccagccagacgcagtcgctcttacacgctgcccagactgtcgccgt
acagtccttgcatgccgtatgccgtaccaccgaccgcactgcgtcccagcaccagcaccc
agcgtcaccgccaaacccgcagccggggcgcccaaagctcctcggggtggagccagcggt
tccaggggcagcgccggtgctggatcgggtgctgcggccgcagcgggcggcggcggaggg
aggtctggcggcggccgcggcggcggcggccgcggcagtggcaggggcccggggcggccg
ccgggttcaggcaagccaggtggggcgcggcatatgcggagtttggcgtcgctcagccgt
gatctccccagtgcctccgccccgtggattgccgcgatgcccgacgtgtcagcagcggcg
gcggcgcgccacgtgccgacgaagctgaagaaagtcacgttcccagggtcaccgacggcg
gcggttgccgacgttgctggcgactgcggcggtttagagggtgaggcagcggttgcgctg
gaagcgggggatgacgcgtttgcggcggcagcttccacacagccgtcagcgagcgacggc
gatgacgaggaggaggatgcagcagcggcaagagggggaatcggagctgtgggagacacg
gcggtaaacagcaatggaggaggcaatgcagtgacggcgaaggcggccagcacctgggct
ggggctgggcttgggggcaagtccgtagcgtctgccccgcagacagcttccgggttgctg
tcccgcttcctcggcggccttactggcgccttcgtgttccctgccgcgacgaggcgggct
cggtcgtcctgtccgaaccggataaagaacggggtaacgagttcgggtcagccggcggcg
gctgcgccagctgccggcggcacgacacaggcggcggcgtgcagcggggcgcaggggccc
caggatcgctgcggcggagaaaggagctcgacggggtggggccctgcagtgcagccggga
tgtggggcgggaaatggcgcaggtcctggcctctcttccgttgccacgggcggcaacgga
ggcgttgcctccgcgccggcggttggctgcgcggttgggcctaaggaaggaactgggtgc
ggcgcgcgggcaagtcccgccgctaagcgcggtgcacagccgcagtcgctgcaacagcac
gcaacgaaacggcagcagcagcggcaggcgagcattgcggcggcgacggcaattgcggca
gcggcgaaatcggaggacgtggcggaaggggaagatatggaggcagcggcggaggcggcg
tgcggcggaggagaaggaggaggaggcgcagcagcagcaacacagcaggacgccactgta
ccttcggcagcatcaaaagccagcgccccggccccgcccgcgtcggaacctccgtcctcc
ttgcctcaggacatctccacggctatggaggagcccgccaatggcgctttcgggaccgac
ccggcagcagtagcagcagcagcagcagcatcccaacgtcccgtcggggccgcggcggcc
tcagccctcccgcatcccccgtcagctccccctggcgcgggtggggatgcggatgtagca
gggagaagtaccgccaagtaccctcaatccggccctcctcaaggcacctccccggtgcag
cactaccagcagcagcagcagcggctggttggtgcagcagctgggtcgcaagggtcatcg
cccggtgtgctgctggcggcgggctttgcgaaccggaaacgaccagcggttcaggagctg
ctgcggcccgggtcccggctgcgaggccagatgctggtgactggacccagacctgtcggt
gttggcgccggggtaccacagcaaagaccccttcctggcgtcgccagtggcagcggcagc
aacggcgcggcggcagttatgcgagctcaacagccagcgcaggtgtcagggcaagggccg
gtgctggggtcgggccagcccatgcagcgcagcgggactggacccttgcccagccagacg
gctggatcgggggctatgggcggagttgcgccgccgggtcagcgtctggtcgggacccag
ccccctaattccaaggcccctggcctgatgcccctggcggctatggggggggcccccggc
gggaccatgagtggtgcgctgcggcagagctccaacgggctgatgcctccgggcatgatg
ccgacacctggctcggggccggggatgatacccacacctggagcgggacctggaggcata
gggcccaagcaggccagcggaggcggcatgattcccacacctggcggaggcgcctcactg
actcccgtgcctggcacgttcatgatgatcgcaacgccggggcccggatcgaatgccgga
cctatgaagccgcccgcgctcatgactgcgccgggatgtgcaggactgccggccgctgca
gctacggcggcggcggcgacgccagcgctggcggttccccgcgctttcgtgcctggcact
ctcctcactccggctcaggtccaggccacggcgcaggcgttgctacaggagcagcaccac
ttgcagattgcggcgcagctgcagaaggcacaggaacagctacagcatgcacagcagctg
caccagcaagcgccgcatggctcacaggcacagcacgcgcagcagctacagcaggcacaa
ctgcagctgcaacacgcacagcagctgttccaggcgcaggtacagatgcagctgcagcag
cggatcatggcggcgtcgcaggcacaggcccagctacagcagcaagcccaggctcaagct
caagctcaggcacagacgcagcagcagcagcagggccagccgcaagcagtgcaagggcat
ctgccgcaacaggcacagacgcaatcgacgcagcagcactatacgcctgctacacaactg
caacagtag
DBGET
integrated database retrieval system