KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_97916
Entry
VOLCADRAFT_97916  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K15361  WD repeat-containing protein 48
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    VOLCADRAFT_97916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_97916
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     VOLCADRAFT_97916
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz DUF3337 WDR55 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_EML Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_DCAF4 WDR54 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 9622645
NCBI-ProteinID: XP_002956911
JGI: 97916
UniProt: D8UDZ2
LinkDB
Position
Unknown
AA seq 766 aa
MHTNRDRNVALVFRPQDVTKHCAGVEAILIPSIPNHKVLFTASRDSTVKRWDVAGPEPAL
EASFEGHADWVNDLALIGNLLITCSNDHTVRLWRAGSESGHLLHTLAAHSDYVTRLAAAP
ECRLVVSAGLRGEVFSYDVERGLHTQLHLRGAHSGCEDGAAEGETASWRSLFPLGSKVRE
EACSVYSLALSPSAGLLAAGTSESLVRLLDPRTGGGVCKLRGHKDVVRALAVNSCGTKLL
SGASDGTIKLWDVGMRRCVQTFQVHADSVWALLSPDDSLSYVYSAGRDRALFRTNTQTCF
SELLALENGPVCALAVDPDARPAPAALRISHELAAGLGPLVRQPLVTIPGIPAIAEHHVL
ADQRRVLTRDVQGNVALWDVLLGTEMVLYGKADFDAKRRELSDQRSVPPWFTCDHRLGCL
CITLSPSTAFNAEEYGVDVGFGDVAEHVKVNHGKLVLECVFAKWRHMRVQRIMQSSRCCI
SPGGSSAGSAGTARGGLATQDGSGGRSVCCGGDNDGYCGGEGIDERVWYYRQPWPKYWQI
GTVPAVICSRSDGQRWRLLLTSFDGSETEPDDVPTWVADVVLRSNSLAPLLSKITFYLLP
VKGSNLPTLSITRLQASHLLEFLAAVQMRLCFYRARAHAQCEELPGQLGLTRSAFWCRGF
QVRKVAEYCCDKLREHGIHLEALSATPKERIPLSPLRVSVAAGGQLYVSYRALELTCNGL
AVPYDMNLAAVKKFLWLEQDDLTFHYGVRDPAHPAPQPSQLVPSGG
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcatacaaacagggaccgtaacgtcgcgcttgtttttcggcctcaagatgtgacaaag
cactgcgctggcgtggaggcaattttgattccttcaattcccaaccacaaggtcctgttt
actgcatctagggactctacggtgaagagatgggacgtagcgggcccggagccagcgctg
gaagccagcttcgaaggccacgctgactgggtcaacgaccttgccctcatcgggaacctc
ctcatcacctgctcgaatgatcacaccgtccggttatggagggctggctcagaaagtggt
catttgcttcacactctagcagcccactccgattacgtcactcgcttagctgctgccccg
gagtgccgcttggtggtgtcggcggggctacgtggcgaagtcttcagctacgacgtggag
aggggcctccacacacagctccatctgcgaggcgcccatagcggctgtgaggacggggcg
gcggagggggagactgcttcctggcggtcattattcccgttggggtctaaggtgcgtgag
gaggcttgctccgtgtactccctggcgctcagcccctccgccgggctgctggcggccggg
acctcggagtcgctggtgcggctgcttgacccgcggaccgggggcggtgtgtgcaagctg
agagggcacaaggatgtggtccgggctctggcggtgaacagctgcggcactaagttgctg
agtggggcctcagatgggaccattaagttgtgggatgtgggcatgcggcgctgcgtacag
accttccaagtgcatgccgattcggtgtgggcgttgctttcacctgatgactcattgtcg
tacgtgtacagcgccggccgtgaccgcgccctcttccgtaccaacacgcaaacatgcttc
agcgagctccttgcgctggagaatggccctgtgtgtgccctggcagtagatcccgacgct
cgacccgcgcctgcagccctgcgtatctcccatgagctggccgcgggcttggggccgctt
gtacggcagcccctggtaacgataccgggaattccagccattgcggagcatcatgttctc
gcagaccaacggcgggtgctgaccagggacgttcagggcaacgtggcattgtgggatgta
ctgctgggtacggagatggtgctatacggcaaggcggatttcgacgccaagcgccgggag
ctttcagatcagcgctcggtcccaccctggtttacatgcgatcacagacttggctgtctt
tgcatcaccttgtcgccctccacggctttcaatgcggaggagtacggcgtcgatgttggt
ttcggagatgtggcggaacacgtcaaggtcaaccacggcaagctggtcctggaatgcgtt
ttcgccaaatggcggcatatgcgggtgcaaaggataatgcaaagcagtcgctgctgtatc
agccccggcggcagcagcgccggcagcgctggtacggcgcgtggcgggttggcaacccaa
gatggttccggaggccgatccgtctgttgcgggggcgacaatgacggctactgtggaggc
gagggcattgatgagcgagtgtggtattaccggcagccgtggcccaaatattggcaaata
ggaacggtacctgcagttatctgctcgcggtcggatgggcagcgctggcggctgttgttg
acgtccttcgacggctccgaaaccgaacccgatgacgtacccacctgggtggctgatgtc
gtactacggagcaatagcctggctcctctgctgtccaagatcacattttacttgctgccc
gttaagggatccaacttgcccaccctatccatcacgcggcttcaagcctcgcatctgctg
gagttcttggccgccgtccagatgcgtctgtgtttttatcgtgcacgtgcgcatgcgcag
tgcgaggaactgcccggtcaattaggtttgactcgttctgcattttggtgtcgtggcttt
caggttcgcaaggtggccgaatactgctgcgacaaattgcgggagcatggaatccacctg
gaagccctctcagcgacacctaaagaacgcattccgttatctccgttgcgagtcagcgtg
gccgccggggggcagttgtacgtgtcgtaccgcgctttggagctgacctgtaatggcctg
gctgtaccgtacgacatgaacctcgcagcggtcaagaagttcctgtggctcgagcaagac
gaccttaccttccattacggagttcgcgacccagcccatccggctccccagccgtcgcag
ttggtgccctctggcggatag

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