Volvox carteri f. nagariensis: VOLCADRAFT_98220
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Entry
VOLCADRAFT_98220 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15559
regulator of Ty1 transposition protein 103
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcn03021
]
VOLCADRAFT_98220
Transcription machinery [BR:
vcn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
VOLCADRAFT_98220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
TFIIA
Dala_Dala_lig_N
Herpes_UL32
Motif
Other DBs
NCBI-GeneID:
9620616
NCBI-ProteinID:
XP_002957168
JGI:
98220
UniProt:
D8UES2
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSGGGMNVNRESLVSRLQSLNVSQQSIEGTSKWCLFYIKDAKSVVNIWVEEFGRTTTERR
IAFLYLANHILQEGRKKGREFADEFFRVLPKALASVSRSSDAKLRNSAKRLVDIWDERKV
FGSAQVRVLKEHLNGGGGSTPSKSNSGGTGGNAGADNAVPSTGNDLDRRKLAAVGSLADV
LYEVANAAARSSEWQTKCLQIKADLASMDASLTEVAAARTTLATALECLKAESERRKKAV
TYIRMHLSQQTFHFSNLHLHPQEDSLKRTEDAHAALTAQKGELDERHAALLKQEQEQQER
EQRERELEEALQQQQQQQEKQQQELRQQQEQQQQQQQQPVAMGGMGTDGPPPFLGLPPGG
LPGMPPMMPPPFPMPGMDPSAPPFGLPGMPPFPAALLGPMTGMNPLGPLPPFLSPMPGMN
LNMPHPPGMNPMTGPGGPMNPMGGGGGGGGAPPGGGTMGQLVGGLPDLAGALSALSATGF
GGVGGGGDSGTAGPTANGSQPPQQQQLQPQSSGGGMPQVHGQALPGPQGSGGLPHSHGGP
GQTPPQQMQQPGIDQLAAALANNSDQTAMLLANAFASMSQHHPLPPQQQANQGMGISGGF
GGSPMGNGDGDPMDAPYDPEFPD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcatgaacgttaaccgcgaaagcctcgtatcgcggcttcaaagcttg
aacgtcagccagcagtcgattgagggcacctcgaaatggtgtctcttctacattaaggat
gcgaagtcggtggtcaacatttgggtggaggagttcggccggacaacaacggaacggaga
atagctttcctgtacctggcgaaccacatcctgcaggagggccgcaagaagggccgtgag
ttcgcagacgagttctttcgagtgctgcccaaggcgctagcctccgtcagccgctcctct
gacgcgaagttgcgcaactccgccaaaaggctggtggacatttgggatgaacgcaaggtg
ttcggatcagctcaggtgcgggtgctgaaggagcacttgaacggaggggggggaagcacg
ccctccaaaagcaactctggcggcaccggtggcaatgctggtgctgacaacgccgttccc
agcacagggaatgacctggatcgacgcaagcttgcggccgtgggtagcttagctgatgtg
ctgtacgaggtagcgaatgcggcagcgcgcagcagcgaatggcaaactaagtgcctgcaa
atcaaggcggatttggcctctatggacgcctctctgacggaggtggcagccgctcgcacg
actctggccactgcgctggagtgcctcaaggccgagagcgagcggcgcaagaaagccgtc
acgtacatacggatgcacctgtcacagcagacttttcacttcagcaacttgcaccttcat
ccccaggaggatagcttgaagcggaccgaagacgcccacgcggcgctaacggcccagaag
ggggagctggacgagcggcacgcggcgttgttaaaacaggagcaggagcagcaggaacga
gaacagcgggagcgggagctagaagaggcattgcagcagcagcaacagcaacaagagaaa
cagcaacaggagctaaggcaacagcaagagcagcaacaacaacagcagcagcagccagta
gccatgggtgggatgggaactgacgggccgccccccttcctggggcttccgccgggtggc
ctgccgggtatgcccccaatgatgcctccgcccttcccaatgcccggcatggacccgtcc
gcgccgccttttggactgcctggcatgccgccattcccagccgcgctcctgggtcccatg
actggtatgaatccccttgggcccctaccgcccttcctgagccccatgcctggcatgaac
ctcaacatgccgcacccgccgggcatgaatcccatgaccggtcctggagggccgatgaac
cctatgggcggtggaggcggtggcggtggagcaccaccgggaggcggcacgatgggtcag
ctagttggcgggctaccggatctcgccggcgcgctgtccgcgctcagcgccacgggcttt
ggtggtgtaggcggtgggggtgattctgggacggcagggccgacagccaacggttctcag
cctccgcagcagcagcagctgcagccgcagtcttccggtggcggcatgccgcaggtgcat
ggccaggcgctgccaggaccacaggggtcggggggtttgccgcactcacatggcggacca
gggcagacaccgccgcaacagatgcagcagccgggtatcgaccagctggcggcagcacta
gcgaacaactcggaccagaccgctatgctgctggcgaatgccttcgcaagcatgagccag
caccatccgctgccgcctcagcagcaggccaatcaggggatgggtatcagcggcgggttt
ggtgggagtcctatgggtaatggcgatggcgaccccatggatgcaccgtatgatccggag
tttccggattaa
DBGET
integrated database retrieval system