Volvox carteri f. nagariensis: VOLCADRAFT_98269
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Entry
VOLCADRAFT_98269 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
K_trans
Motif
Other DBs
NCBI-GeneID:
9626686
NCBI-ProteinID:
XP_002957237
JGI:
98269
UniProt:
D8UF09
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MSGFGSFELGAEAGEETAGGAVEAVVDCSLAVVAEAPQPPGAAPLTSALTACSEHPMGTS
PLPPPPPSPPPQQQLLLSRGHGDIVLMRRLGNHVSYSNPVYPLQPRLPLTGVRPLILEAA
FAADNGDITAVVWAMRSKGPHLAACCEVFAVALRPVWERQQQQQQQQPPGGGGAPGVSGP
PRPNSDNLHLSTVDVQLLLRTKLPPFVARVVRQPHPHPHPGEQEQPEFFEQPVGGAAGCD
CKVSGSGDRHWMLVLGFDPSTAGLEEDDGVDGCAGRQLFYWQLHVIPFPAIRGCSFLLLL
LLLLLLLLDLSIQPYETHTRMATGAATMDITMPSGGADSACGGGGGGDPMDDEGDDDDDV
DPRTLEAAAARLAHMTSEEREGAQWGAQWADIYKESGLDGVGAMGHEPTMDLAAWRFRSG
GSGGGAAGGQAGAVGRGQRIDKPLAPVWRLSCGAHRLLTAEGPVRTCQHHHQQQAHHQAA
QHPQTQPPLLLLGVTDDVDCAVLRVDCSGAGRSAGPSGAVGERGGNGEGQLPEAVQVRHV
VSIPALAYVAAGAIDSGSNTSLAGVCGTSTTPLAAVLVESQCFMYMYGSTSTQEEYGKQQ
VVDLQLEDGETVLGARLVEISWSNFLLLSWSSIGVIFGDIATSPLYVYNSIFADLLPGSQ
PRKADVLGGASLIFWTLTLVVMVKYIGVREQPGQDHSPHGVTNHVDPSSARHLPYVLQYG
RRASPATAVDTGGGGAVLPSDGGDECGSDSDSDTQGDVAAVGRRGGGGCQRPWWRWGAAG
KDRVADFFRRSRRAQIGLWAVAVVATAMLMGDGVLTPAMSVLSAVSGLTEVVPGLSQEVV
VGVTILVLVLVFAIQPMGTGQVGVFFAPVIAIWLLANAAINCYILAEHGGAVFAAINPAH
IVTFFSRHGATAWRSLGAVMLCVTGAEALFADLGHFSRGSISVAFVFLAYPCLIVTYFGQ
AAHLLTHPQDTDVFWKSLPRTLRYPMLILATLATIVASQALISGLFSIIRQAMILGAFPP
ARIAHTGGRSLARATQVYIPLVNVVLFALCCIVVVGFKNTVALGKAYGLAVMTDMLTTTF
LVTLVMLSVWEVSLLLVVPFFGLFLVLEGGYWSANIIKVPEGGWFTLSVAAVVSAIMLIW
WAGSRRLGERLAAVTAGAHIRLLGCPPPPSLLHQPPPPPPAAAATAATAATLLATRSVGG
GGGNSASAAHPRQRLYRLASWAVPQQTLRLKAPDAAGDGTATAYPSSPRAMRATSLRLAR
LEPKTSRPLRIRSVPATRSAPLGEISKALLEEIEEGQLSSCAAMPPLGPTASLAAAAAAA
AEPLTSRHSDHSADVGNRKTVVVSESSFAPGTLALVLPVDEIQTAAAPAAAAATTVPLDG
FSDSDLEMGDSTARSALLAPVVVPLAARLPGIGVYYMDEKVGGANSALTTLPPVLVHFLR
NVQAIHDACVFLSVRNLPTPSVSRRHRLQVYTPLCVSAPNFYLVVARYGYLDVIDHGPAF
ISELVDAVLRQLVAVAARAAKGQLPAAFKRNSQSNELSNFLERDEAAGATDDQTEKPLAR
MGQHNPVVMTHLGRSSGANRGNGPRGSGGDSVAAMPQAVTAAAAAVMSGPTELAMTSRRL
AGSNAAAAAPAGPAAAGDAAPVAAHNSALEAARTLVEEAVAAFLEARLHGVVYYASRALI
RVDERQGRFWIVQYINWFLYGLLYRWLAAIAYVDMERWRVPSQQLVELGMPVYI
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttcgggagtttcgaacttggagcagaagccggggaggagaccgcgggcggt
gcggttgaggcagtggtagattgcagtctggcggtggtggcggaggccccgcagccgcca
ggcgctgctcctcttacctcggccctgacagcgtgctcagagcacccgatgggcacctcc
cccctgccgccaccaccgccttccccaccaccccagcagcaactcctgctatcccgtgga
catggggatatcgttctcatgcggcgcctgggcaaccatgtgtcgtacagtaatccagta
tatcccttgcaaccacgtctgccgttgaccggtgtacggccgctcatcctcgaggcggcg
ttcgcggcggataacggcgacatcacggcggtggtgtgggcgatgcgcagcaagggcccc
cacctggccgcctgctgtgaggtcttcgcggtcgcgctccggcccgtgtgggagcggcag
cagcagcagcagcagcagcagcctcctggagggggaggggcacccggggtgtcggggcct
ccacgccccaacagcgacaacctgcatctgagcacggtggatgtacagctgctcctgcga
accaagttgccgcccttcgtggcgcgggtggtgaggcaaccacacccgcacccgcaccca
ggggagcaggagcagccggagtttttcgaacagccggtcggtggtgctgcgggttgcgac
tgtaaagtgagcggaagtggggaccgccattggatgctggtgctgggcttcgatcccagt
accgcgggacttgaggaagatgacggtgtggacgggtgtgcgggccggcagttgttctat
tggcagctgcatgtaatccctttcccggccatccgcggctgctcctttctcctgctactg
ctcctgctactgctcctgctactggacctgagcatccaaccttatgaaacacacacccgt
atggcaaccggcgcagcaaccatggacatcaccatgccgtcaggtggggccgacagtgcg
tgcggtggcggtggcggtggcgacccaatggacgatgaaggcgacgacgacgacgacgtg
gatccgcggaccttggaggcggcagctgcacgactggcccacatgaccagtgaggagcgg
gagggggcgcagtggggggcgcagtgggcggacatctacaaggagagcgggctggacggg
gtgggggccatggggcatgagcccaccatggacctggcggcgtggaggtttcggagcggc
ggcagcggcggtggagccgcgggaggacaagccggtgctgtaggccgggggcagcgtatt
gacaagcccctggcgcccgtttggcggctcagctgcggggcccaccgcctgctgacggcc
gaagggcccgtacggacatgtcaacaccaccaccagcagcaggcgcatcaccaggccgcc
caacaccctcagacacagccgccactgctgctgctgggcgttacagatgacgtggactgt
gccgtactgcgagtggactgctctggcgccgggcggagtgcggggcccagcggggccgtg
ggggagcgagggggtaacggggaggggcagttgccggaagccgtgcaggttcgccacgtc
gtcagcatccccgcactcgcctacgttgcggccggagctatcgactcaggcagcaacacg
agcttagccggcgtctgcggcaccagtacgacacccctggcggccgtactcgtggagagc
cagtgctttatgtacatgtacggcagtacctcgacgcaggaggagtacggcaagcagcag
gtggtggatttgcagttggaggacggtgagacggtgctgggggcgaggctggttgagata
tcctggtcaaacttcctactcctgtcctggtcaagtatcggggtcatttttggcgacatc
gccacctcgccactctacgtgtacaacagcatcttcgcggaccttcttccaggcagccag
cctcggaaggccgacgtgctgggcggcgccagcttgatcttctggacactgaccctcgtg
gtgatggtcaagtacattggggtgcgcgagcagccgggtcaggatcattccccccatgga
gtgaccaaccatgtggacccgagcagcgccagacatctgccgtacgtactgcagtacggt
cgccgcgcatcgcccgctaccgctgtcgacactggcggtggaggtgccgtactgcccagt
gatggcggtgacgagtgcggctctgacagtgatagtgacacgcagggggacgtggcggca
gtggggcggcgcgggggggggggctgccagaggccctggtggcggtggggggccgccggg
aaggaccgggtcgcggacttctttcgtcgcagccggcgggcgcagatcggcttatgggcc
gtggcggtggtcgcaacggccatgctgatgggcgacggagtcctcaccccggccatgtca
gtgctgtccgctgtgtccggtctcacggaggtggtccccggcctgagccaggaggtggtg
gtcggtgtaaccatactggtgctggtgctggtcttcgcaatacagcccatgggcaccggg
caggtgggtgtgttcttcgcgcccgtcatcgcaatctggctgctggccaacgccgccatc
aactgctacatactcgccgagcatgggggagcggtgttcgcagccatcaaccccgcccac
atcgtcacgttcttcagccgccacggcgccaccgcctggcggtctctgggcgccgtcatg
ctgtgtgtcaccggtgcagaggcgctgttcgcggacctggggcacttctcgagggggagc
atatcggtcgcctttgtgtttctggcctacccctgcctcatcgtcacctacttcgggcag
gcggcgcacttgctcacacacccccaagacacagacgtgttttggaaatcgctgccccgg
acgctgaggtaccccatgctcatcctggcaaccctcgccaccatcgtcgcctcgcaggcg
ctcatcagcggcctgttcagcatcatacgacaggccatgatcctgggggccttccccccc
gcccgcatcgcccacacgggtggcaggagccttgcacgagccacccaggtatacatcccg
ctggtcaatgtggtgctgttcgcgctgtgctgcatcgtggtggttgggttcaagaacacg
gtggcgctgggcaaggcgtacgggctggcggtgatgacggacatgctgaccaccacattc
ctggtcacactggtgatgctgtccgtgtgggaggtcagcttgctgctggtggttcccttc
ttcggactgtttctggtgctggagggaggatactggtccgcgaatatcatcaaggtgcct
gagggcggctggttcactctctctgtggctgcggtggtatccgccatcatgctcatttgg
tgggcgggtagtcgccggctgggggagcggctggcggccgttaccgcgggagcacacatt
aggctgctgggctgcccgccgccgccgtcactgctgcaccagcccccgcccccgccgcca
gcagcggctgccactgcggctactgccgccaccctcctcgccacacgctctgtcggcggc
ggcggcggcaactccgcctctgccgcccacccccggcagcggttgtaccgcctggccagt
tgggctgttccccaacagacattgaggcttaaagcgccggatgctgccggtgacgggacg
gcaacggcgtacccgtcctcgccgcgggccatgcgggcgacgtcactgcgcctggcgcgg
ctcgaacctaagacctcacggcccttgcgcattcgcagcgtccccgccacgcggtccgca
cctctgggagagatcagtaaggcccttttggaagagatagaggaaggccagctcagcagc
tgcgccgcgatgccgcctctggggccgacggcgtcactggcagcggcggcggcggcggcg
gcggaaccgctcactagccgtcacagcgatcacagcgccgatgttggaaaccgaaagacc
gtggtggtttcggagagcagttttgcgccgggcacgctggcgctggtgctgccagtggat
gagatccagacggccgccgcccccgccgcagccgccgccaccactgtaccgctggacggc
tttagcgacagcgacttggagatgggcgacagcaccgcgaggtcagcgctcctggcgccg
gtggtggtgccgctggctgcgcgactgccgggcattggcgtctactacatggatgagaag
gtcggcggcgccaactcggccctcaccaccctcccccccgtgctggtgcacttccttcgg
aatgtgcaggccatacacgacgcgtgcgtcttcctgtccgtacggaacctgcccacaccc
agcgtgtcacgccgccatcggctgcaagtctacacaccgctctgcgtctcggcccccaac
ttctacctggtcgtcgcccggtacggctatctggacgtcatcgaccacggacccgccttc
atcagtgagctcgttgatgccgtactgcggcagctggtagctgtggcggcccgcgccgcg
aaggggcagctgccggccgccttcaagcgcaactcccaaagcaacgagctgagcaacttc
ctggagcgtgatgaggccgcgggggcgacggacgatcagacggaaaaacctctggcgcgc
atgggccagcacaaccccgtcgtcatgacacacctgggccgcagctcgggggcgaacagg
ggtaacggccctaggggatctggcggcgactcggtggcggcaatgccgcaggccgttacg
gcggcggcggcggcggttatgtctgggccgacggagcttgcgatgacaagccgccgcctg
gcgggtagtaatgcggcggcggctgcgcctgccggtcccgcagcagccggagatgctgcg
ccggttgcggcgcacaacagcgctctggaggcggctcgaaccctggtggaggaggcggtg
gcggcgttcctggaggcgaggctgcatggtgtcgtgtattacgccagccgagcgcttatt
cgggtggatgagcggcagggtcgcttctggattgtgcagtacatcaactggttcctgtac
ggcttgttgtacaggtggttggcggcgattgcctacgtggacatggagaggtggcgagtg
ccctcgcagcagcttgttgagcttggcatgcccgtatacatttga
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