Volvox carteri f. nagariensis: VOLCADRAFT_98786
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Entry
VOLCADRAFT_98786 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03013
Nucleocytoplasmic transport
vcn03015
mRNA surveillance pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_98786
09122 Translation
03013 Nucleocytoplasmic transport
VOLCADRAFT_98786
03015 mRNA surveillance pathway
VOLCADRAFT_98786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_98786
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_98786
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
VOLCADRAFT_98786
Spliceosome [BR:
vcn03041
]
Complex C
Other components
EJC/TREX
VOLCADRAFT_98786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
RRM_1
HeH
Motif
Other DBs
NCBI-GeneID:
9627130
NCBI-ProteinID:
XP_002957706
JGI:
98786
UniProt:
D8UGA7
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MKASDVPSLKVAELREALKERGLSTTGTKAVLAERLLTALAAEEKDGKGASDSPSGKGDS
SSEDAADAPEPKGTTQVEAQTQPTPSKTADKAAPAARATAKPAPSDEPKAPEEDKQGAAS
VNPGADSEPPLAAEAPAASVGAAENSARSPAKSNDPEDEQPRAAGDGEDQPEAAKAKEVV
EDVKVEDAVMTEAQPEAGGGPEAEHEEQVDYGTDEITAPDESVEDGGPLPPRTEKMGLGE
KEGGQSQADNSVDEQQQQQQQHPPKSQGRRTGQADEDTAMADAAAGDAAGAGKEADADGV
TDGQGAPADGGGEAAAPGTAVGAAAPLTTPPASAGKEDVKESAATGGSVRQDAGTQQPSA
AVVTTKPPARPDPTPPPAAGSGRKRQPIEFKMDEVEQRVAAKRAAREATAGEGVGAASPA
EEKITPASGPAVTAAPAGKAQSSAAAAATPPEATTKVQAQAVTEKDVPAAAPPVPEAPEV
PAVAAAAAAATERAAKLQKLDAAGRKAAGLVGAARPAGGAPAGPKGGGGGAAAATVAAKR
LSAPPPLEGPATRALRIDGFVRPFTENQVRQFMSQHGTVEDLWMPTIKNYCYVVFAEVTH
GEAAAAATNGVVWPSGNPTSILKPSYVSPEDAATAIANGRAGLMDPPKGGGAVGGPLKSP
GTAAAAAGGGGSGSTLASPKGGPAPAPLAVVGAAGVRRDTLTAAVAAAAADAAAAKQKTP
AAAVAAGANTAAGRKRSEPEGELPPAAADASTGDAGDNAAAAQPAAVAEVVAAPEPPALS
LDDLFKKTKSKPIIYWLPLSEEVAAAARKKRKEEEAAARKAEEEEAAADQERERARHQQP
DRDRERDRAGDRGGWGALPPPPPLPGPPPARDGRGGYDRDRQGYGRDRR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcctcggatgtgccaagcttgaaggtggcagagctcagggaggcgcttaaggag
cgtggcctctcgacaacagggacgaaggccgtgcttgcggaacgtttgctgacagctcta
gctgcggaggagaaggacggcaagggtgcttcggactccccttctggcaagggcgactcc
tcttccgaagacgccgccgacgctcctgagcccaagggcacaacacaggtcgaagcgcaa
acccagcccaccccatccaaaactgccgacaaagccgcgccagcagccagagcaacagcg
aaacccgcaccgtccgatgagcctaaggcgccagaggaagacaagcaaggcgcagcgtct
gttaaccccggggcggactctgaaccccccttagcagcagaagcaccggcagcatcggta
ggagcagcagagaactcagcccgctcacctgcaaagtctaacgacccggaagacgaacag
cctagggcggccggcgacggcgaagaccagcccgaagctgctaaggccaaagaggttgtg
gaagacgtgaaggtggaggatgctgtgatgacggaagcgcaaccagaggccggggggggc
cctgaagcggagcacgaggaacaggtggattacggcacggatgagattacagcaccggac
gagtcggtcgaggacggagggcctcttcctccgcggacggagaagatggggctgggggaa
aaggagggaggtcagtcgcaggccgataattccgtagacgagcagcagcagcagcagcag
cagcacccgccgaagtcacaagggcgaaggacagggcaggcggacgaggatacagccatg
gcggacgctgccgccggcgatgccgccggcgctggcaaagaggcagatgcggacggtgtc
actgatggacagggcgctcccgccgatggcgggggcgaggcggcggcgccggggacggct
gtgggggcggcggcgcccctcacgacgcccccggcatcggcgggcaaagaggatgtcaag
gagtctgcggcgacggggggcagtgtgcgacaggacgccggtacgcagcagcctagtgca
gcggtggtaaccaccaagccgccggcgaggccggacccaacgccgccgccagccgccggc
agcggcagaaagcggcagccgatagagtttaagatggatgaggtcgaacagcgagtggca
gcgaagcgtgcagccagggaggcgacggcaggggagggcgtgggggcggcatcgccggcc
gaggagaagatcacgcccgcatcagggcctgcggtaacggctgcgccagcaggcaaggcg
cagtcttcagcggcagcagcagcaacaccaccggaagcaaccacgaaggtgcaggcgcag
gctgtcacggagaaggacgtcccggcagcggcgccgccggtgccggaggcgccggaggtt
cctgcggtggcggcggctgcggcggcagctaccgagcgggctgccaagcttcagaagttg
gacgcggcagggcgcaaggcggctgggctggtgggtgctgcaagaccagcgggaggagca
cctgcggggccaaagggtggtggtggtggtgcggcggcggcgacggtggcggccaagagg
ctgtctgcgccgccgccgctggagggcccagctacgagggcgctgcgcatcgacggcttt
gtgcggccgttcactgaaaaccaggtacggcaatttatgtcgcaacatggcactgtcgag
gatctctggatgcccaccattaagaactactgttacgtggtctttgcggaggtgacgcat
ggagaggcagcggcggccgccaccaacggcgtcgtgtggccttctggcaatcccaccagc
atactgaagcccagctacgtgtccccagaagatgccgcaacggccatcgctaacgggcgc
gcgggcctgatggatccgcccaaaggaggcggcgccgtcgggggccccctgaagtccccc
ggaacggcggcggcagccgctggcggcggcggcagtggcagtacactggcatcgccaaag
gggggcccggcaccagcaccgctggcggtggtcggtgcggctggagtacgtcgcgacacg
ctgacggcggcggtagcggcggccgcggccgatgcagcggcagcgaaacagaagacgccg
gcggcggcagtggccgctggtgcgaataccgccgctggtcggaagcgatccgaaccggag
ggggagttgccgccagcggccgctgacgccagcacaggcgacgcaggggacaacgcggca
gcggcgcagccggcggcggtcgccgaggtcgtcgctgctccggagccgccggcgctttca
ttggacgacttgttcaagaagaccaagtccaagccgatcatctattggctcccgctttcg
gaggaagtggcggcggcggcgcggaagaagcggaaggaggaggaggccgcggcgcgcaag
gccgaggaggaggaggccgcggctgatcaggagcgagagcgggcgcgccaccagcagccg
gatcgtgaccgtgagagggacagggcgggggatcgcggcgggtggggagccctgccaccg
ccgccaccgctgccgggaccgccgccggcacgggacggccgtggggggtacgacagggac
cggcaggggtacggcagggatcgcaggtaa
DBGET
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