Volvox carteri f. nagariensis: VOLCADRAFT_99177
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Entry
VOLCADRAFT_99177 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
9623111
NCBI-ProteinID:
XP_002957991
JGI:
99177
UniProt:
D8UH64
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MYGFETNKHTRDICAGAARAGPNTTDRDHGDPPAPEPAGALPGTPKPPEHLTPQWWRPRW
KVTCDQILEDRIPWKPGKGQAKDTTGQQQIVYDLYNDVEDIVEVLAGPITKRIVPSNVKP
PKKQKIGADKTTTHEQYYTVRWKDTITPISIVGAYTSMGYVPRQLLPVTGLYGTRIDHHF
RRAIWEPSDIPAAQLAQSVTMFPFLGLEVALVAMFAGIVMMPAKRRVGDQVVELQKVHAD
LHAQLTAIEQADDYQKAASLLASDPLACLNKKKFSTVMGHAWDTYVSLKSQMASVSAHIA
QLEMTMEQPAMKVLVSDKSGRVVERPFKDLDYVNDGWVNKSGKEHKALKRENRELNQVYH
ALQKVNRNLEDEREARRDEAPPEQIEELEKATNDAITEGENLLTDLNTRLRKAMLVGWET
VESLDLPDCCKSEEERSKLLSAHKRVVAEKECERRGNKPSAQKPFGAGFRQRQFMAPSPG
FGQAQVGFGSVQGAMLPHQALPFTPGLQFGGMAPMSQGGGKPPRAPKPTDQCHRCKQFGH
FANMCSNPPAPRSWTKQWVQQGFPLWWKQAGITPPPRVMRNHQGALEQRAFVTESVSALL
AAGAVRQVAGVGDAFAASFWERAGRLVVPSHLGLLAESQAFAASSRAASTKKVYVYPWEG
FKSWCRAGGYCYLPASPVMVGMYLTSVAKTASSYATVKLASAAIFMQHDLACEGANPTKH
PFCKAVRAAAKRSLGTAVLNRPFAPQPAIIEVSVTRLASSHGSKHTLLLAGTQARLMSIS
GTQARLTSISGPFGSRNSAVAAAAGTGLRGGGGGSAAAAAAAALPVPLASLESLELLAFL
SSGLPQGLSIGSDLANHLALLSSPGAGGAEVLNVAAIIERIVQLLTNVHSHFSRSSKRIT
ALKRVASEAGTRGNRMLKNVEPRWISIYRPLCRVLDESAALTAYFDPELALLSAALAMRG
VAAMVTAVAMARREGSQPTLSMGLGSLVRADSAAFKPDVPEAVSLSEIHATPFTTGLPKE
LLAAIAAQAAGGGSGGVAAVGSGGSGSGGGSQRHGHAVGEDGRAAGGGGGRPGCEAVVEA
VEAAGGEGGDEGGGRRGRGGARVQDAAGGGVAPDETGSRGSHGGSGGAATAVNAMRPPGG
GGGGGEGSRALRMRGSSGSDRSGASGSSLRAEGPALHRCRGGGGGGGSAAAATDTAVGPF
GGRNGIAVAASAADAGAAGTGPFGSRNSAVAAAAGTGLRGGGGGSAAAAAAAALPVPLAS
LESLELLAFLSSGLPQGLSIGSDLANHLALLSSPGAGGGGAAGNRKSATIGIDAGSGSGN
WAREGGASRGAAATATAVVVPGGEPAAAAAAPQSPSGAHSPSNGMASLLAAVAAAADEEQ
QQKYPHQRHHPFHQLQYQKQKQHHQHEHHHQQQYHNGQDSVPLHPHGAPAPQVAAAAVTT
VTTGHGARGQQSTGRGHGGRGSNSAFSGRALGSFELAAALRGPDAANAGGDGFYPGGNLP
FPLTTNNLNHHHAYRLSNGGGGSGSYDGGMLGDWGINLPISALTNLGHTASGADIAAEGG
ADGVGVSVGSLLSAAAAAAAAAGGGGSTYHRRAEPLLRAPSLADAVNGGGGDDGGATWPQ
ALSAAWPTGALSSFPGRAGGGGGGCRH
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtacggatttgaaaccaacaaacatacgagagatatttgcgcgggggcggcaagggcc
ggcccaaacaccaccgacagggaccacggtgatccgcctgcacccgaaccggccggagcg
ctaccggggacgccgaagccaccagagcacctcaccccgcaatggtggagacctcgatgg
aaagtcacctgtgatcaaatactggaggacaggataccctggaagcctggaaaaggccag
gcaaaggacacaacggggcaacaacagatcgtttatgacctatacaacgatgtagaggac
atcgtagaagtactcgcgggccctatcacaaaacgcatcgtcccctcaaacgttaaaccc
cccaagaaacagaaaatcggggccgataagaccacaacccacgaacagtactacacggtt
cgctggaaagacactatcaccccgatatctatcgtcggcgcatacaccagcatgggatac
gtgcccagacagctattaccagtgacaggtctttacggcacgcggatcgaccaccacttc
cgcagagcgatatgggaaccgtcagatatccccgccgcgcaactcgcgcagtcggtaacc
atgttccctttcctcggcttagaggtcgccctagtggcaatgttcgcgggcatcgttatg
atgccagctaaacgtagagtcggtgaccaagtggtagagctacagaaggtgcatgcagac
ttgcacgcgcagttgaccgccatcgaacaagccgatgactaccagaaggccgcctccttg
ctggcctctgaccctctagcatgtttaaacaagaagaaattttctaccgtgatgggccac
gcctgggatacctacgtctccttgaagagtcaaatggcgagtgtcagcgcgcacattgct
caactggagatgaccatggagcagccagctatgaaggttctcgtctccgacaagtctggt
cgcgtcgtggagcgcccatttaaggacctggactacgtcaacgatggctgggtcaacaag
tcgggcaaggagcacaaggcgctcaagcgggagaaccgggagctgaaccaagtttaccat
gcccttcagaaggtcaaccgcaacctggaggatgaacgtgaggcgcgccgcgatgaggcc
ccaccggagcagattgaggagttggagaaggcaactaacgacgccatcaccgagggtgag
aacttgctcacggacctgaacacgcggctgcgtaaggctatgttggtgggttgggaaacc
gttgagtcgttggacctccctgactgctgcaagtccgaggaggagcgtagcaagctgttg
tccgcgcacaagcgtgttgttgctgagaaggagtgtgagcgcaggggtaacaagccctcg
gcgcagaagccgttcggtgcaggtttccgtcagcgccagttcatggcgccctcgcccggc
ttcggccaggcccaggtcgggttcgggtccgtgcagggcgcaatgctaccgcaccaggcg
ctgcccttcacaccggggctgcagtttgggggcatggccccaatgagtcagggtggcggc
aagccgccgcgggccccgaagccgacggatcagtgccataggtgcaagcagtttggacac
tttgcgaacatgtgctcgaacccacccgcgccacgctcgtggaccaagcagtgggtgcag
caggggtttccgttgtggtggaaacaggcaggcatcacaccgccgccgagggtcatgcga
aatcaccaaggggcgctggagcagcgggcctttgttaccgaatccgtctcagcacttctg
gcagcaggagctgtgcggcaggtggcgggtgtgggcgacgcctttgccgcgtccttctgg
gagcgagcagggaggctggtcgtgccaagccatctcgggctactggcggagagtcaagca
tttgccgcgtcatcgcgggcggcctccacgaagaaggtgtacgtgtatccgtgggaaggt
tttaagtcgtggtgccgtgcgggcggctactgctacctaccggcaagcccggtcatggtg
gggatgtacttaacgtcggtggctaagacggcgtcaagttacgcgaccgttaagctggcg
agtgctgcgattttcatgcagcatgacttggcgtgtgagggggcgaacccgacgaagcat
cccttttgcaaggctgtgcgcgcggcagcgaaacgctcgctcgggacggctgtgctgaat
cgtcccttcgcaccccaaccggcgattattgaagtttcggtaaccaggctcgcctcctcc
cacggaagcaagcacactcttctgctcgcaggtacccaagctcgactcatgtctataagc
ggtacccaagctcgactcacgtctataagcggcccttttggcagccgcaattcggcggtc
gctgccgctgccggaacgggcctccgcggcggcggcggtggcagtgccgctgccgccgcc
gccgccgcccttccggtgccgctggcctcccttgagtccctggagctccttgcctttctg
tcctcgggtctgccgcagggtttgtcaatcggctccgacctggccaatcatctggcgcta
ttgtcatccccgggagccggcggcgcggaagtgctcaacgtggcagccatcattgagcgc
atagtccagctgctcaccaacgtgcacagccacttctcgcgcagctcgaagcgcataact
gcgctcaagcgggtggcgtcagaggctggcactcgcggcaaccgcatgctgaagaacgtg
gagccaaggtggatcagcatctatcggccgctatgccgtgtgctcgatgagagcgctgcg
ctgacggcttatttcgacccggagctggcattgttatcggcggcactggcgatgcgggga
gtagcggcaatggtgacggcggtggccatggcgcggagagaagggtctcagccaactttg
agtatgggactgggttcactggtcagagcggactctgctgccttcaagccggacgtccct
gaggcggtgtccctatccgagatccacgccactcccttcacgacggggctacccaaggag
ctgctggcggccattgcggctcaggcggctggcggaggcagcgggggggtcgcggcggtt
ggcagcggcggcagcgggagtggaggagggagccagcgccacggtcatgcagttggcgag
gatggtcgggccgcaggtggtggaggcgggcggcccggttgcgaggctgtggtggaggcc
gttgaggcggctgggggggaaggcggtgatgaaggaggggggaggagaggaagagggggt
gcgagggtgcaggacgcggcgggtggtggcgtcgcacccgatgagaccggaagtcgtgga
agccatggcggcagtggtggcgccgccaccgccgtcaacgcaatgcgtccccctggcggc
ggcggcggcggtggcgaagggtcgagggctctgcggatgcgcggcagctccggcagcgac
cgctccggcgccagtggcagcagccttcgagccgagggcccagcactgcatcgttgcaga
ggaggcggaggcggaggcggctctgccgctgccgccactgataccgctgtagggcctttc
ggtggccgcaacggtatcgccgtcgccgcctctgccgcagacgccggtgctgctggcaca
ggcccttttggcagccgcaattcggcggtcgctgccgctgccggaacgggcctccgcggc
ggcggcggtggcagtgccgctgccgccgccgccgccgcccttccggtgccgctggcctcc
cttgagtccctggagctccttgcctttctgtcctcgggtctgccgcagggtttgtcaatc
ggctccgacctggccaatcatctggcgctattgtcatccccgggagccggcggcggtgga
gctgcagggaaccggaagagcgccacgatcggtatcgacgccggcagcggaagtggaaac
tgggctagggaaggaggggccagccggggtgccgcagccacggcgacagcggtggtggtg
ccaggtggcgagccagctgccgccgccgcggcaccgcagtcgccctcgggtgctcactcg
ccttcgaatggcatggcatcgctgctggcggcggtggcggcggcggcagacgaggagcag
cagcagaagtacccacatcagcggcaccacccattccaccaacttcagtaccaaaagcag
aaacagcaccatcagcacgaacatcatcaccaacagcaataccacaacggacaggattcc
gtaccgttgcatccgcacggcgcgccggcgccgcaggtggccgcggcggcggtgacgacc
gtgacgacagggcacggggcgcgggggcagcaatcaacgggccgcggccacggcggccgc
ggcagcaatagtgccttctcgggccgtgcgctaggaagcttcgagctagcggcggcgttg
cgggggcctgacgccgccaacgccggcggtgacggcttttaccccggaggaaacctcccc
ttcccactaacgactaacaaccttaaccaccaccatgcttaccgcctcagcaacggtggc
ggtggcagtggtagttacgacgggggcatgttgggggattggggcataaatcttcccatc
tctgctctgaccaacctgggccatactgcgtcaggcgccgatatcgcggcggagggcggt
gctgacggcgtcggcgtcagcgttggctccttgttgtccgccgcggcggcggcggctgcc
gccgccggtggcggcggcagcacataccaccgccgcgccgagccactgttgcgggcgccg
tcgctcgccgacgcagtcaacggcggcggcggcgacgacggcggcgccacctggcctcaa
gctctgtctgctgcctggccgacgggagcattaagctccttcccaggacgcgctggcggc
ggcggcggcggttgtcgccattga
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