Volvox carteri f. nagariensis: VOLCADRAFT_99672
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Entry
VOLCADRAFT_99672 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VOLCADRAFT_99672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_99672
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
VOLCADRAFT_99672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ZGRF1-like_N
SRA_ScoMcrA
Motif
Other DBs
NCBI-GeneID:
9627870
NCBI-ProteinID:
XP_002958390
JGI:
99672
UniProt:
D8UIC0
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MPLSTVPNGSSGAYGNIRAKRPLHTGKALPAKAQRLETPTATQAPCIGAASGVPAITEVF
AVLYTKKELLSKKKASKKFADGIITVFGDGSAILYDQDSKIVTKGRFKRFGSLENGDQVL
EIGNWHAEVDKELTSEDFRRWDGGRGRLRDGRPVVPVVIDPYLGRHLRPHQQEGVRFMYE
AVMGLTSPDRTGCILADEMGLGKTLQVITLAWTLLRQGPEGRPLAAKVLVVAPATLVDNW
GREVKKWLGSERLQLCLYLPCLSLHCYGTVTGQTYLQTLCLQQASAAKQHYETLRKHAGD
LKGAFDLLVCDEGHRLKSVGGNKTIDALLSLDCPRRILLTGTPVQNDLKEFYALLSFVVP
DVLGTPAVFNRVYGIPITRSQEATATAEEKELGAGRASELQSKVAVFILRRTQALLAKHL
PPLTSLTLFCKPSDQQIGLYSAVLRSKAVASLLYGGGGGEDNTLAVITALRKVANHPDLL
LDPSGDAGEATAEGANTGRTCSSSCLPSFSKQFTATGSHQAAGKMQVLSLLLSAIAARGE
RCVVVSTSTATLDLVGQLVCKAQGLTTVRIDGGTSVEGRQTVVDNFNKLGMGQVFLLSTR
AGGAGLNLVGACHLVLYDSDWNPAMDQQAMARIWRDGQTKPCFVYRLLTTGTIEEKVYQR
QLMKADLASATVTGGSGAAGGSKGGGKFTREELRQLFSLNTATASDTRDLLPQGKVAGLR
WKEPEEVMEDGSPLAAVAASGLVTCLNQMEPTAVSEMARDGAAAGGSPAGHHPLEEGDAP
PAHGGISVGNDSADGDAGERDESAGVAAGDDLGSKGDDIRSPSRVDAAGDGVVEGARSGT
QRDDAGCLDVLEDW
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgccactttcaactgttccgaacggcagcagcggtgcatatggcaacatccgcgcaaag
cgacccctccatacggggaaggccctgcccgcgaaagcgcagcggttagagacgccaaca
gcaactcaggcaccatgcatcggagctgcttcgggggttcctgcaatcacggaagttttt
gcggtactgtacacaaagaaggaactgctcagcaagaaaaaggcaagcaaaaagtttgcg
gatggcatcatcacagttttcggcgacggcagcgccattctgtacgaccaggatagcaaa
atagtcaccaagggccgtttcaagcgctttggcagcctggaaaacggcgaccaggtgctc
gagattggcaactggcatgcggaggtagacaaggagctgacgtccgaggatttcaggcgg
tgggatggcggccggggtcggctgcgtgacggacggcctgtggtgccagtggtcatcgat
ccctaccttggccgccacctgcggccccatcagcaggagggcgtgcggttcatgtacgag
gcggtcatgggcctgaccagtcccgacaggacgggctgcatcttggcggacgagatgggc
ctgggcaagacacttcaagtgataactctggcatggacgctcctgcggcaaggcccagag
ggcaggcctttggcggccaaggtgctggtcgtggcgcccgcaacgcttgtcgacaactgg
ggacgcgaggtcaaaaagtggctcggctcggagcgcctgcagttgtgcctctacctgccc
tgcctttctttgcactgctacggcaccgtcaccgggcaaacctacctacagacgctgtgc
ctgcagcaggcctcggccgccaagcagcactacgagacgctccgaaagcatgccggcgat
ttgaagggtgccttcgacctgctcgtgtgcgacgagggccacaggctgaaatctgttggc
ggcaacaagacgatcgatgcgctgctcagcctggactgccctcgccggatcctgttgact
ggcacaccggtgcaaaacgacctgaaggagttttatgcgctcctctccttcgtagtcccg
gacgtgttgggaacgcccgccgtgttcaaccgcgtgtacggcatacccatcacccggtcc
caggaggccactgcaacggccgaggagaaggagctgggtgcgggaagggccagtgagctg
caatcaaaggtggcagtcttcatcctccgccgtacacaggcgctgctggcaaagcacctg
ccgcccctcacatcgctcacgcttttctgcaagcccagcgaccagcaaatcggcctgtat
agcgccgtactgcgatccaaggctgtagcatcgctgctttacggcggcggtgggggagag
gacaacacgcttgccgtgatcaccgcgctgcggaaggtggccaatcacccggacctgctg
ctggaccccagcggagatgctggggaggcgacggcggagggcgcaaacacgggtcgcacg
tgctcctccagttgccttccaagcttcagcaagcagttcacagcaaccgggtcgcatcaa
gccgctgggaaaatgcaggtgctgtcactgctgctatctgcgattgcggcgcgaggtgag
cggtgtgtggtggtgtccaccagcaccgccactctggacctggtgggccagctggtgtgc
aaggcgcaagggctgacgaccgttcgcatcgacggcggcacgagtgtcgagggccgccag
accgttgtagataacttcaacaagctgggaatggggcaggtatttctgttgtccacacgg
gccggaggcgccgggctcaacctggtgggcgcctgccacttggtgctgtacgacagtgat
tggaatcccgcgatggaccagcaggcgatggcacgcatttggcgtgacggtcagaccaaa
ccctgcttcgtgtatcgcctcctcacgactggaaccattgaggagaaggtgtatcagcgc
cagctcatgaaggcggacctggccagcgccactgtgactgggggttccggagcggcgggc
ggcagcaaggggggtggcaaatttacccgtgaggagctgcgtcagctgttcagcctcaac
accgccaccgcgtccgacacgcgggacctgctgccgcagggcaaggtggctggactgcgg
tggaaggagccggaggaggtcatggaggatggcagtccgcttgcggccgtggcggccagc
gggctggtgacctgtttgaaccaaatggagccgaccgccgtgtccgagatggctagggac
ggggcagcagccgggggcagcccggccgggcatcacccccttgaggaaggggacgcgccg
ccggcgcatgggggaatttctgtcggcaatgatagtgccgatggcgatgcgggagagcgc
gacgagtcggccggcgttgcggccggggatgatttgggcagcaagggtgatgacattcgg
agcccttcccgggtcgatgcggctggggatggggttgtggagggagctcggtcagggaca
caaagggatgatgcgggctgcttggacgttttggaggactggtag
DBGET
integrated database retrieval system