Vibrio cholerae O1 O395: VC0395_0080
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Entry
VC0395_0080 CDS
T00520
Symbol
phrB-2
Name
(GenBank) deoxyribodipyrimidine photolyase, cyclobutane pyrimidine dimer-specific
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_0080 (phrB-2)
Enzymes [BR:
vco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VC0395_0080 (phrB-2)
DNA repair and recombination proteins [BR:
vco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VC0395_0080 (phrB-2)
Prokaryotic type
VC0395_0080 (phrB-2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABQ19076
UniProt:
A0A0H3AFL8
LinkDB
All DBs
Position
1:complement(87220..88629)
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AA seq
469 aa
AA seq
DB search
MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ
QELAALNVPLFYQQVADFQAAAVAVSQLAKTLNAKQVLANRDYELDEQQRDQSAQQLLSE
QGITWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPAALWNVPSA
LAELVWHPEQAFDYPRIDSTPWAADFETVRAQLREFCRERVQDYHQARDFPAQEGTSSLS
PYLAIGVLSARQCVARLYHESSMGELSEGAQAWLSELIWREFYQHLVAIEPNLSKSRDFV
EWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHID
WRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRRW
VPELRSVSSAYIHQPWAYPAVNSVLYPARLVDHKQEREVTLRLYKTAKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagactggtttggtttcgtcgtgatctgcgcagctttgataatactgcgctcaccgcc
gcgttaaacagtggcgatccggttgcggcgatgtatatcgctactccagagcagtggcat
cagcaccatctagcgcctattcaagccgatttgatttggcgacgtttggcagagttgcaa
caagagcttgctgcgcttaacgtgccacttttttatcagcaagtcgcggattttcaagcg
gcggctgtggcggttagccagttggcgaaaacacttaatgccaaacaagttctcgccaat
cgtgattacgaattggacgagcagcaacgtgatcaatcggcacagcagttactgagcgaa
caagggataacatggtctgcttttgatgataaatgcgtattacctcccggttcggtgcgc
acgaaacagggcgaattttttaaagtgttcacccctttcaagcgcgcatggctcactctt
tttcagccgcctgtgattggaaaaaatcgtcccgcagcgctttggaacgtaccgagtgcg
ttggccgaattggtttggcatccagaacaagcattcgattaccccagaatagacagcacg
ccgtgggctgcggactttgagactgtgcgcgctcaattgcgtgaattttgccgtgaacga
gtgcaggactaccatcaagcgcgtgattttccggctcaggaaggcaccagttcgctctca
ccctacttggcgattggcgtgttatcggcgcgtcaatgtgtggctcgcttgtatcacgag
tcatcaatgggcgaactcagtgaaggggcacaagcctggttgagcgaactcatctggcgt
gagttttaccagcatttggttgcaattgagcctaatctttcgaaaagtcgtgactttgtg
gagtggggcgcgcgtttggagtggtggaatgataacgaaaagttccagctctggtgtgaa
ggcaagactgggtatccgatcgtcgatgcggcaatgcgccaactgaaccaaaccggatgg
atgcacaatcggttaaggatgatcgtggcgagctttcttaccaaagatctgcacatcgac
tggcgctggggtgagcgctatttcatgagtcgcctgattgatggtgattatgcggccaac
aatggtggttggcagtggtgtgcatccactgggtgtgatggacagccctattttcggatt
tttaatccggtcagtcagggggagaaatttgacccgaatggcgacttcatccgccgttgg
gtgccggagctgcgttcagtttcttcggcttatattcatcaaccttgggcttatccggct
gtcaatagcgtgttatatcctgcgcgactagttgatcataagcaggaaagagaagtaacc
ttacgtctgtataaaacagcgaagggataa
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