Vibrio cholerae O1 O395: VC0395_0463
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Entry
VC0395_0463 CDS
T00520
Symbol
ydbK
Name
(GenBank) pyruvate-flavoredoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco00010
Glycolysis / Gluconeogenesis
vco00020
Citrate cycle (TCA cycle)
vco00620
Pyruvate metabolism
vco00650
Butanoate metabolism
vco00720
Other carbon fixation pathways
vco01100
Metabolic pathways
vco01110
Biosynthesis of secondary metabolites
vco01120
Microbial metabolism in diverse environments
vco01200
Carbon metabolism
vco01210
2-Oxocarboxylic acid metabolism
Module
vco_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VC0395_0463 (ydbK)
00020 Citrate cycle (TCA cycle)
VC0395_0463 (ydbK)
00620 Pyruvate metabolism
VC0395_0463 (ydbK)
00650 Butanoate metabolism
VC0395_0463 (ydbK)
09102 Energy metabolism
00720 Other carbon fixation pathways
VC0395_0463 (ydbK)
Enzymes [BR:
vco01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
VC0395_0463 (ydbK)
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GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
EKR
Fer4_7
Fer4
TPP_enzyme_C
Fer4_16
Fer4_6
Fer4_2
Fer4_21
Fer4_8
Fer4_9
Fer4_10
Fer4_17
Fer4_18
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ABQ19163
UniProt:
A0A0H3AGT0
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All DBs
Position
1:complement(518230..521469)
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AA seq
1079 aa
AA seq
DB search
MTWITDANTAVARVAYQLSEVLAVYPITPSTSMAESCEQWASQQKSNLLGDVPKLVEMQS
EAGSIAVVHGAAMSGALATTFTSSQGLLLMIPSLYKLAGELTPCVIHVAARTVATHALSI
YCDHSDVMAIRQTGVAMLCASNAQEAQDLAAIATFSALQCRLPFVHFFDGFLTSHAITQI
EPLSEEALSALLPMPALVDFRARALTPDRPTLRGATADPDSYFQCREAQTPYHQSTPEQV
QNIMNCFETQTGRRYQLVEYIGHPQAQSVIVAMGSSVDTIKPVVLAGVQQGERIGVIQIR
LYRPFPSQALRDALPATVTHISVLDRTKEPGSHGEPLYLDVLSALYSQRANSIRLSRGRY
GLSGKAFYPEDVEAIFTMMQAPEQEQMHEFVVGIEDDVSQLTLPKTISATRDKPYQSVLM
YGYGGDGSVSAGKNLIKTLGQNWHVQGQFEYDSKKSANVTTTHIRFSQQPITAPYPVRHA
WLVSLSNLKLLHERDIASKLIANGYLLLNTALTGQALWAALPPALQSRLQALSVQVSTID
ADGLIERHQLGNKTSIVMQAAAARLLSQHTEQALLTSLEASLTEQLKHRSDQQLTQSLQC
LNQAYQSVCEMPFAIPSETTMAIQSQPKIWGASLVEQLLAGKGDALPVSAYPADGVWPTN
TSQLEKRNLAEQLPVWETDLCTQCGYCVAICPHSAIRARIVSETHPTLSELKSLPYRSRQ
QPDAHYVLQVSPDDCTGCQLCTQVCPAKDRQEPERKALNMFEKNLSYQSEQQRFTHFQAL
PKQSAYQQQRIDVKTLQHVEPYFEYPNACAGCGETPYIRILTQLFGDRLMIANATGCSSI
FGGNLPTTPYSQDSDGRGPAWANSLFEDNAEFGLGMNMALEALQSRAQRLLGGYTPQSPL
PDLRSQIAELKQRLPAHSEEQLLADYLSEKMVWMIGGDGWAYDIGFGGLDHVMRSGRNIN
ILVLDTQCYSNTGGQKSKSTPQGQTAKLCSLPNPSPAKDLVKLYQDLPGAFVARIALGAN
INQTIKALQAAGEHSGPSLVVAYSPCIEHHYDLAHSAQVTKEVVKSGAWPLYAGVAQQD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgacttggattactgacgcaaatacggccgttgcccgcgttgcttatcaactgagtgaa
gtgctagccgtctaccctattacaccgagcaccagcatggccgaaagctgtgaacaatgg
gcaagccagcaaaagagtaatctgctgggtgatgtacccaaacttgtggaaatgcagtcg
gaagcaggcagtattgcggttgttcatggcgccgccatgagcggtgcacttgccactacc
tttacctcatcgcaaggtttattgctcatgatcccaagcttatacaagcttgctggtgaa
ctgacgccttgtgtcattcatgtggcggctcggactgtcgctactcatgcgttatccatt
tactgcgatcattcggacgtgatggccatccgccaaacgggcgttgcaatgctctgcgcc
agtaatgcgcaagaggcgcaagatctggccgccattgccactttcagtgctttacaatgc
cgcttaccgtttgtgcatttctttgatggattcctcacctcacacgccattacccagatt
gagccgctctccgaagaggcgttatctgcactgctacccatgccagcgttagttgatttt
cgtgcccgagccttaacgcccgaccggccaactctacgcggagccactgccgatcccgac
agttactttcagtgtcgcgaggctcaaacaccataccatcaaagtacgcctgaacaggtg
cagaacatcatgaactgttttgaaacacagaccggacgccgctaccagttggtcgagtat
atcggtcatccgcaagcacaatctgtgattgtcgcaatgggatcttccgtcgacaccatc
aaaccagtcgtccttgctggcgttcaacaaggtgagcggattggcgttattcagatccga
ctatatcgcccttttccaagccaagccttacgggatgcgcttccagccacggtgactcat
atcagcgtattggatcgcaccaaagagccgggcagtcacggcgaaccgctttatcttgac
gttttaagtgccttgtattcccagagggcaaactcgatccgactctctcgcggtcgctat
gggttatcaggaaaagcgttttacccagaagatgtcgaagcgattttcaccatgatgcaa
gctcccgagcaggagcaaatgcacgagtttgtggtgggtattgaagatgacgtaagccaa
cttactctaccgaaaacgatttcagcgacgagagacaagccctatcaaagtgttctgatg
tatggctatggcggcgatgggagtgtcagtgcgggaaaaaatctgattaaaaccctaggc
caaaactggcatgtacagggtcagtttgaatacgactccaaaaaatctgccaatgtcacc
acgacacatatccgtttcagtcagcaaccgatcactgctccctatccggttcgtcacgct
tggttggtttcgctcagcaatctgaaacttctccatgagcgtgacattgccagcaagctg
atcgccaatggctatctgttgctcaacaccgcactgacggggcaagcactgtgggccgct
ttaccgcccgcattgcaaagtcgccttcaggctttatcggttcaagtgtccaccatcgat
gccgatggcttgattgagcgccatcaactcggcaataaaaccagtattgtgatgcaagcc
gcggcggctcgattattaagccagcataccgaacaggcgttattgacctcactggaagcg
agtctaaccgaacagctcaaacaccgttcagaccagcaactgacacaaagcctgcaatgc
ctgaaccaagcgtaccagtcggtgtgtgagatgccttttgcgatcccaagtgaaacaacg
atggccatccagagccagccgaagatttggggcgcgagcttggttgaacaactgctggcg
gggaaaggcgatgcgctacctgtctcggcttatccggccgatggagtatggcctaccaat
acttcgcagttagaaaagcgcaatcttgctgaacagctgccggtttgggaaaccgatctt
tgcactcaatgcggttactgcgtcgcgatttgcccgcattcggcgattcgtgcccgcatt
gtgagcgaaacccatcccaccttgagtgagttaaaaagcctgccttatcgctcaagacag
caacccgatgcgcattatgtactgcaagtgtcgccggatgactgtactggctgccagtta
tgcactcaggtttgcccagcaaaagatcgacaagagccagagcgtaaggcattgaatatg
tttgagaagaacctcagttatcagtcagagcaacaaagattcactcatttccaagccttg
ccgaagcagtcggcctatcagcagcagcgaattgatgtcaaaacattgcagcacgttgag
ccctattttgaatacccgaatgcctgtgcaggatgcggagaaacgccttatatccgtatt
ttgactcagttattcggcgatcgattgatgattgcgaacgcgacaggctgctcctcaatt
tttggcggcaatctacccacgacgccttacagtcaggatagtgatggacgaggccctgct
tgggccaacagcctatttgaggataatgccgaatttggcttgggcatgaatatggcactg
gaagccttacaatcgcgtgcgcagcgtttgctaggcggatataccccgcaatctccgctt
cccgatctaagatcgcagattgctgagctgaagcagcgacttcctgctcactcggaagag
caactgctggccgattatttaagcgaaaaaatggtgtggatgataggaggtgacggctgg
gcttatgacatcggctttggcggactcgatcatgtgatgcgcagcggacgtaacatcaat
attctggttctggatacgcagtgttactccaatactggtggacaaaaatccaagtccact
ccgcaaggacaaaccgcgaaattgtgcagtttacccaatccaagtccagccaaagatctg
gttaaactttaccaagatctgcccggtgcgtttgtagcgagaatagccttgggtgccaac
atcaatcagaccattaaagcgctgcaagctgcaggtgaacattctggtccgtcattggtt
gtcgcctattcgccctgcatcgagcaccattacgatttggcacacagtgcgcaagttaca
aaagaggtggtgaaatctggcgcatggccgctgtatgcgggcgtcgcgcaacaagattag
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