Entry
Name
(GenBank) conserved hypothetical protein
KO
Organism
vco Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:vco00001 ]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:vco03016 ]
VC0395_A0058
Enzymes [BR:vco01000 ]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VC0395_A0058
Transfer RNA biogenesis [BR:vco03016 ]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VC0395_A0058
Prokaryotic type
VC0395_A0058
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
2:52050..53135
Genome browser
AA seq
361 aa AA seq DB search
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFVVTLSEVSDVAAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVDGD
LALWDQRLQAGEVAISAALAGDNALPTSGQALPLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQNLSWQVQEDQITLRFSLDAGSFATSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq
1086 nt NT seq +upstream nt +downstream nt
atgactgatattctctctcctctggcttatttgtgcggtaaaccgactgcgaaggccaaa
ctcaaagcgctgccagaacacttccaagtcaatgaagtgttgggctactccttaacggga
cacggcgagcacttgatggtgcgtattcgtaagacaggggagaacaccagctttgtggcc
aatgaattagccaaagcctgtggcgtaccttcacgcgcggtgagctgggcgggtttaaaa
gacaggcatgccgttaccgagcagtggttgagtgtgcatctgccgaatggcgaaacgccg
gatttctctgcgtttctagcacaataccctagcattgaaattcttgaggtgactcgccac
gacaaaaagcttcgtccgggtgatttgcaaggcaatgaatttgtcgtcaccctatcggaa
gtaagcgatgttgcagcggtattaagccgtttagaaacggttgctgaattgggcgttccc
aattacttcggtagccagcgttttggacgtcatggcaataacctcagtgaggcgcgccgt
tgggggcgtgacaatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgcg
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgagcagggctgttttgcc
cgctttattgaaggtgatatcgctttagctgagcagcaaatgtttaatgttgatggtgat
ttagccctttgggatcagcgtttgcaagctggagaagtagcgatttcagcggctttggcg
ggcgataatgccttgccgacttctggtcaagccttgccactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccgggggaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaacttaagctggcaagtgcaagaagatcaaatcactctgcgt
ttctcattggatgcgggtagctttgccacttccttagtgcgtgaattgatcgaagagatc
ccagtggtgcgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa