KEGG   Vibrio cholerae O1 O395: VC0395_A0058
Entry
VC0395_A0058      CDS       T00520                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
vco  Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:vco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vco03016]
    VC0395_A0058
Enzymes [BR:vco01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     VC0395_A0058
Transfer RNA biogenesis [BR:vco03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VC0395_A0058
 Prokaryotic type
    VC0395_A0058
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ABQ20421
UniProt: A5F9D8
LinkDB
Position
2:52050..53135
AA seq 361 aa
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFVVTLSEVSDVAAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVDGD
LALWDQRLQAGEVAISAALAGDNALPTSGQALPLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQNLSWQVQEDQITLRFSLDAGSFATSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactgatattctctctcctctggcttatttgtgcggtaaaccgactgcgaaggccaaa
ctcaaagcgctgccagaacacttccaagtcaatgaagtgttgggctactccttaacggga
cacggcgagcacttgatggtgcgtattcgtaagacaggggagaacaccagctttgtggcc
aatgaattagccaaagcctgtggcgtaccttcacgcgcggtgagctgggcgggtttaaaa
gacaggcatgccgttaccgagcagtggttgagtgtgcatctgccgaatggcgaaacgccg
gatttctctgcgtttctagcacaataccctagcattgaaattcttgaggtgactcgccac
gacaaaaagcttcgtccgggtgatttgcaaggcaatgaatttgtcgtcaccctatcggaa
gtaagcgatgttgcagcggtattaagccgtttagaaacggttgctgaattgggcgttccc
aattacttcggtagccagcgttttggacgtcatggcaataacctcagtgaggcgcgccgt
tgggggcgtgacaatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgcg
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgagcagggctgttttgcc
cgctttattgaaggtgatatcgctttagctgagcagcaaatgtttaatgttgatggtgat
ttagccctttgggatcagcgtttgcaagctggagaagtagcgatttcagcggctttggcg
ggcgataatgccttgccgacttctggtcaagccttgccactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccgggggaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaacttaagctggcaagtgcaagaagatcaaatcactctgcgt
ttctcattggatgcgggtagctttgccacttccttagtgcgtgaattgatcgaagagatc
ccagtggtgcgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa

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