Vibrio cholerae O1 O395: VC0395_A0176
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Entry
VC0395_A0176 CDS
T00520
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vco03016
]
VC0395_A0176 (truB)
Enzymes [BR:
vco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VC0395_A0176 (truB)
Transfer RNA biogenesis [BR:
vco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VC0395_A0176 (truB)
Prokaryotic type
VC0395_A0176 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ABQ21562
UniProt:
A5F928
LinkDB
All DBs
Position
2:179320..180258
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AA seq
312 aa
AA seq
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MVRRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLL
LPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacatactggcgcgcttgatcctctggcgacgggcatgttgccaatctgcctcggtgaa
gccactaagttttcccaatttctgctcgattctgataaacgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgacacctcagattctgatggtcaagtggtacaaacgcgtcctgtt
cacgtggattacgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaa
gttccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgt
cagggtattgaagtgccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcat
cgctttgaaggtgatgaagtggagatggaagtacactgctcgaaaggcacttatattcgt
accatagtcgatgatctgggtgaaatgctgggctgtggagcgcatgtgaccatgctgcgc
cgtgtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgct
ttggttgaacaagcccatcgtgacgaaaaagcggtggcggacgttctcgatccgctatta
ctgccgatggatactgccgtggaagctttacccgaagtcaacgtgatcccagaactgatg
acacttattcagcatgggcaagcagtacaggtttcgggggcaccatccgacggtatggtg
cgcattactggcggcgagcagaagctattccttggcgttggcgagattgacgataacggt
aaggtcgcgccgaaacgcttggtggtgtacggcgaataa
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