Vibrio cholerae O1 O395: VC0395_A0188
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Entry
VC0395_A0188 CDS
T00520
Name
(GenBank) GGDEF domain protein
Organism
vco
Vibrio cholerae O1 O395
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PDU_like
Motif
Other DBs
NCBI-ProteinID:
ABQ20034
UniProt:
A0A0H3AHX7
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Position
2:complement(192404..194461)
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AA seq
685 aa
AA seq
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MTKFRKIHSLAFKQAKSVFLVSVLLGLCFSFYHTLSDLHQEQSKVQEHYNFKLVQSYENA
SQAAYHLNNLLAEQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQLVSVLASYLT
PAVSVFSAELHQPNSNVVVGKLSFYIDGSSIAKVFIAKTTRVLLFDLLRNTLLTTILLLF
FYQKLSRPITMLITWVNSLNDTQRSPLPLRLTHDDELSELASTFQSMWKGKELAESKLNQ
LAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLI
KAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISNPYAVDDHQFY
CTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGL
HEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGN
WIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIEL
EITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQ
LHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEE
IAQRFVSNSYRKIQTLPVATNSLQK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatttcgcaagattcattctttggcctttaagcaagccaaaagcgtgttttta
gtctctgtactgttgggactctgttttagtttttaccacaccttatccgatctgcaccaa
gagcagagcaaggtgcaggagcactataactttaaattggtgcagagttatgaaaacgcc
agtcaggcggcttaccatcttaataatctactcgccgagcaagtcgccaccaccttgatg
ctcgaccctggcatcttcaaagtggagattgtggatgactttggcgatgtgatgacacgt
aaagaaaaagcaatcagtgaacagagtcaattagtcagtgtactcgccagctatcttacc
cctgcggtttccgtgtttagtgctgagctgcatcaacctaactccaacgtggtggtcggc
aaactgagcttctacatcgatggctcatcaatagccaaggtgttcatcgccaaaaccact
cgcgtactgctcttcgacctattacgtaatacgctattgacgaccattttactgctgttt
ttctaccaaaagctctctcgcccaatcaccatgctgatcacttgggttaactcactcaat
gacacacagcgctcacctctgcctcttcgtcttactcatgacgatgaactcagtgagctc
gcgtcgacgtttcaatcgatgtggaaaggcaaagagctagcagaatcgaaactcaatcaa
ttggcttattatgacagcctcactggcctcgccaatcgcagtttgttgctgcaaaaattg
agtgatgcgattgaaactgcgcaaaactcgcacagtactggcgtactgttctatctcgac
ttggatcgctttaaaaccattaatgactcactcggtcataccatcggtgaccagttgatt
aaagccgtggcgctgcgcatggaggcatggactaaaaacgactacctgtcagcacgaatt
ggtggcgatgagtttgcagtgctgatcccttatctctcgcctgcgaaagctgaggaagtg
gccaagcagctactcactctgatttccaacccttatgcggtggacgatcaccagttctac
tgtaccgtgagtatcgggatttcggttttcccttccgtaggaagctgtaatattgatgta
ttacgtcaagcggataccgcactgtatcgcgccaaagccagtgggcgtaacaagttcatg
ttctatgagccggaaatgcaggcgcaggtggagtctttccttgaaattgaaaaaggcttg
catgaagcgctcaatcagcgccaactcgagcttttctaccaacctcaggtcgacgagcag
cacaacattattggtgtcgaagcgctgatccgctggaaccatcctaaacgagggttgttg
cctcccggtgtttttatgccgatcgcagaagaaacaggacaaattttaccgataggcaac
tggatcattgagcaagcgtgttatcaatatgcccagtggaaaaaacaaggcattttaccg
ccccattttcgccgtttggcgatcaatatcagcccactacagtttgctcaggagtctttt
attgagcaggtgaaccacgctttacgccaagcagggatcacgggggagccgatagaatta
gagataactgaaagcttactgctggaaaacgttgagagcgccatagaaaaaatggccaag
ttgaaagagagccaaatcagtatttcgattgatgactttggaacaggctactcttcgctg
cgttacctcaagcatcttgcggtcgatgtgctgaaaattgaccgctcgtttgtcaatcaa
ctgcaccttgatgataacgatcaagcgatcgtcgacacaatcttagcgattgccagaaaa
ctgaatttagaagtgattgccgaaggggtggaagacacctctgagttggccgcactcaaa
aaactggggtgtaaccaattccaaggctacctgtttgataaaccgctgcgagccgaagag
attgcacagcgttttgtcagcaacagttatcgcaaaattcaaaccttacccgttgcgaca
aacagtttacaaaaatag
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