Vibrio cholerae O1 O395: VC0395_A0354
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Entry
VC0395_A0354 CDS
T00520
Symbol
tcpB
Name
(GenBank) toxin co-regulated pilus biosynthesis protein B
KO
K10931
toxin coregulated pilus biosynthesis protein B
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco05110
Vibrio cholerae infection
vco05111
Biofilm formation - Vibrio cholerae
Module
vco_M00852
Vibrio cholerae pathogenicity signature, toxin coregulated pilus
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC0395_A0354 (tcpB)
09160 Human Diseases
09171 Infectious disease: bacterial
05110 Vibrio cholerae infection
VC0395_A0354 (tcpB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vco02044
]
VC0395_A0354 (tcpB)
Secretion system [BR:
vco02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
VC0395_A0354 (tcpB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CofB_beta-rpt
N_methyl
DUF1453
PNK3P
Motif
Other DBs
NCBI-ProteinID:
ABQ20713
UniProt:
A0A0H3AKH0
Structure
PDB
PDBj
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All DBs
Position
2:381943..383235
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AA seq
430 aa
AA seq
DB search
MRKYQQGVGLLEAILASAVLGMALVAAGSYYKREAELMIKSSNAFDVIELSSQIQRYASL
SKINNRTNPILKDNKAKEFKDADLKWLKLENCPTAGDVPTTGNNNDLQDQFIACDADYRK
GDLSYFGSQFEFSTYVHPSNPEIQRQIKQVVSYFQYRGMERAFIGDAAGYVISEAKKKGF
SAQDYRIVLIEPDRVGYFESNAISYEEFIENPSARENFLLKATKDRTLALAVSLAQTGEI
AMQRDGSVAFLEDSELCWDTAAGSAKSCLSVRYDTVGNKTELDLKQIDVVSAKGLSFESD
GKTKTPVVSTYETFQDGGRAKTINAIECPTGLNNRFAAVVSSFSTAGQNANFSSESAKDS
QGTTQKDGSKGPHALLSGISLNWTLTNKVWDVTASIGIESGILPTSGIDSGSLLRNPKSL
SFIAFQWCEN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaataccaacaaggtgtcggattattggaggcgattctggcttctgccgtatta
gggatggcattggtcgctgctgggagctattacaagcgggaagctgaactcatgattaaa
tccagtaacgcatttgatgttattgagttgtcatctcaaatccagcgttacgcctcttta
agtaaaattaataatcgtactaacccaatactcaaagataataaggcaaaagaatttaaa
gatgcggatttgaaatggttaaagcttgaaaactgccccacagcaggtgatgtaccgaca
acgggtaataataatgatttacaagatcagtttattgcttgtgatgcagattataggaaa
ggtgatctaagctattttgggagtcagtttgaattctcaacctatgtacatccttccaac
ccggaaattcaacgacaaataaaacaagtcgtcagctattttcaatatcgaggcatggaa
agagcgtttattggcgatgctgcgggttatgttatcagtgaggccaagaaaaaaggattt
agcgcacaagactatcgaatcgttctaatagaacctgatcgtgtcgggtattttgagtca
aatgctattagctatgaagaatttatagaaaatccatccgctcgcgaaaattttctttta
aaagcgacgaaagatagaactctggcgttggcggtcagtcttgctcaaaccggagaaata
gcaatgcaacgtgatggttccgttgcatttttagaagatagtgagttgtgttgggatacg
gcggcaggtagtgcaaagtcttgtctctcggttcggtacgataccgttggaaataaaaca
gaactggatttaaaacagatagatgtggtcagtgcgaaaggcctatcatttgaaagtgat
ggtaaaacaaaaacaccagtggtttcgacttatgagacttttcaagatggtgggcgggct
aaaaccattaacgctattgaatgcccaacaggtttaaataatcgttttgccgcggtggtg
agttcattttcaactgctggacagaatgcaaactttagttcagagagtgctaaggattct
caaggcacaacccaaaaggatggtagcaaaggaccgcatgcgcttctatccggtatatca
ctgaactggacattaacgaataaggtatgggatgtaaccgcctcgattggtatcgagtcc
ggtatattgcctacttcaggtatcgattctggatcgttattacgaaaccctaaatcattg
tcttttatagcgtttcaatggtgtgaaaattaa
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