Vibrio cholerae O1 O395: VC0395_A0484
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Entry
VC0395_A0484 CDS
T00520
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vco03016
]
VC0395_A0484
Enzymes [BR:
vco01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VC0395_A0484
Transfer RNA biogenesis [BR:
vco03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VC0395_A0484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Motif
Other DBs
NCBI-ProteinID:
ABQ21901
UniProt:
A5F2X6
LinkDB
All DBs
Position
2:complement(516900..518324)
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQT
SDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKE
RLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIG
QFVDVKIVDVFPNSLRGELLRTEQEMNLRIATSPSEMKAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacttggggctgccagatgaacgagtacgattcatcg
aaaatggctgacctgcttaatgctgcaaacggctatgagctgacagagatacccgaggaa
gctgacgttttactcctaaacacctgttcgattcgtgaaaaggcgcaggaaaaagtcttc
caccaactcggccgttggaaaaccctgaaagacaaaaaacccggagtcgtgatcggtgtt
ggtggctgtgttgccactcaagaaggtgactcgattcgcgatcgtgcaccttatgtggat
gtcatcttcggcccacagacacttcatcgtctgcctgaaatgattaaacaatcgcaaacc
agcgacgcgcccgtgatggatatctctttccctgagattgaaaaattcgaccgcctgcct
gagccacgtgcggaaggcccaactgcgttcgtttctatcatggaaggctgctcaaaatac
tgtacttactgcgtagtgccttacactcgtggtgaagaagtcagccgtcctatggacgat
gtcctgttcgagatcgctcagcttgccgagcaaggggtgcgtgaagttaacctgctgggt
caaaacgtcaacgcttaccgtggtgccactcacgatggcggcatttgctctttcgctgaa
ttactgcgtttggtcgccaccattgacggcatcgatcgtatccgctttaccactagccac
ccactcgaatttacggatgacattattgcagtgtacgaagacacgcctgagctcgtgagc
ttcctgcacttgccagtacaaagtgggagcgatcgcattctgactatgatgaagcgtcca
catacggcgattgagtacaaatccatcatccgtaagctacgtaaagcgcgcccagatatt
caaatcagctctgattttatcgttggcttccctggggaaaccgacaaagatttccaagac
accatgaagctgatccgcgatgtcgatttcgacatgagctttagctttattttctcacct
cgtccaggcacacccgccgctgactatccttgcgatctgtcggaagaagtgaagaaagaa
cgcctgtacgaactgcagcagcagatcaacagccaagctatgcgttattcacgcctgatg
ctgggtactgaacagcgtattttggttgaaggtccatcgaaaaaagatctgatggagctg
cgtggccgtactgaaaataaccgtgtagtgaacttcgaaggctcaccggatctgatcggt
caatttgttgatgtgaagatcgtcgacgttttcccgaactcactgcgcggtgaactgctg
cgtaccgaacaagagatgaatctgcgtatcgcgacctctccctctgaaatgaaagcgaag
actcgccgcgaggatgagcttggggttgctacatttactccttaa
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