Vibrio cholerae O1 O395: VC0395_A0646
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Entry
VC0395_A0646 CDS
T00520
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VC0395_A0646 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vco03016
]
VC0395_A0646 (trmU)
Enzymes [BR:
vco01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
VC0395_A0646 (trmU)
Transfer RNA biogenesis [BR:
vco03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VC0395_A0646 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
ABQ20050
UniProt:
A5F2F2
LinkDB
All DBs
Position
2:complement(686173..687291)
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AA seq
372 aa
AA seq
DB search
MMSVEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAED
LADAQAVCDKLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEF
ADEVLDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGE
LEKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEH
QGLMYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQL
HWVDRTPITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGE
ICLGGGIIEERI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtctgtagagcacagcgcaaacagccaaaagaaagtgattgtcggtatgtctgga
ggggttgattcctctgtttcagcctatcttctcaagcaacagggttaccaagtggaaggc
ctgtttatgaaaaactgggaagaagacgataacgaagagtattgtactgcggcagaagat
ttagcagatgctcaggcggtgtgtgacaaactcggcatcccacttcataccattaacttc
gcagcagaatactgggataacgtatttgaatacttcctcgcggaatataaggcgggacgt
actcctaacccagatattttgtgtaataaagagatcaaatttaaagccttcttagaattt
gctgatgaagtgctggatgcggactacattgctatggggcactatgtgcgtcgcaccttc
ccgcagaatggcgaaaaaccgcaaatgctgcgcggtttagacggtaataaagaccaaagc
tacttcctttatactctgagtcatgagcaagtggcgcgtaccctattcccagtaggtgaa
ctagaaaaacctgaagtacgccgcattgccgaagaacaaggcttaattaccgcgaagaag
aaagattcaaccggtatttgttttatcggtgaacgcaaatttaccgacttcttatctcgc
tatttgccagcccaaccgggtaaaattgaaaccccggaaggcaaagtgattggtgagcac
caaggcttgatgtaccacactctcggacagcgtaaaggtctgcacattggtggtatgaaa
gagagcagcgaacagccatggtatgtggcggataaagatctcaaacgcaacgtactcatc
gcggtacaaggcgcggatcatcccctactcaaatcgcatggtttggtggcggctcagtta
cattgggttgatcgcacccccatcacagaacctgtacgttgcagcgtgaagacgcgttat
cgtcaaagtgacatcgcttgtaccatcattcccctgagtgatgaccgcatcaaggtgatg
tttgacgagccacaagtggccgtgactccgggacaatccgccgtcttttatcaaggtgaa
atctgccttggtggcggcattattgaagagcgcatttaa
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