Vibrio cholerae O1 O395: VC0395_A0887
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Entry
VC0395_A0887 CDS
T00520
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vco01002
]
VC0395_A0887
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vco01011
]
VC0395_A0887
Peptidases and inhibitors [BR:
vco01002
]
Cysteine peptidases
Family C82
VC0395_A0887
Peptidoglycan biosynthesis and degradation proteins [BR:
vco01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VC0395_A0887
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABQ20578
UniProt:
A0A0H3AHR5
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All DBs
Position
2:901504..903078
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AA seq
524 aa
AA seq
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MMKSRVVAAIALLFFVIPCSATQRFVELGWIDSTSPVNEQITNPALVEQIYHSNNDQLLW
SDLATANHFEAQLEVIHRASFSPLFSRQLFALKSYRQQDRWHEYDVLATDTLLQYLSYAE
QAPKVGIAWFFEGQLDQPLALPSEEAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAY
QSLSSIEFNEVALYEQMERLKRPGDPLSHREALVQRLALVNLDTTSILNDVAYYDASLEK
PIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSMIVVNVPG
FDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRD
SEYLANHHMEIIRGWSDPEVIDPALIDWETVDPATFPYRLRQQAGVQNALGTYKFNTPNS
RAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPVSTQAIALKK
RIPVHIIYQTVWYEEGVLHYRDDIYHYDALALGNGDASPNLTKI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgatgaaaagccgagtcgttgccgctatcgcattgttattctttgttattccgtgttct
gccacccagcgttttgttgaattggggtggattgatagcacttcgccggtcaatgaacag
atcaccaacccggctttggttgagcaaatctatcacagtaacaatgatcagttactgtgg
agcgatcttgccacagcgaaccattttgaagctcagcttgaggtgattcaccgtgcgagt
ttcagccctttatttagccgacaacttttcgcgctcaaaagctatcgtcagcaagataga
tggcatgagtatgatgtgttagcgaccgacactttactgcaatacctcagctatgctgag
caggcaccaaaagtcggtattgcttggttttttgaaggtcaacttgatcaacctcttgct
ctgccgagtgaagaggcgcaactggctttgcatatggcgatcggtaaccagtcgctcgct
cgcttaatggatgaatacaccccacaagaccctgcttatcaacaactgctgcaggcgtat
caatcactctcgagcattgagtttaatgaggtggcactatacgagcagatggagcggctt
aagcgtccgggtgacccattaagccaccgtgaagctttagtgcagcgtttagctctggtg
aatctggataccacatccatcttgaatgatgtggcctattacgacgcctcgcttgaaaaa
ccgatcaagcagtttcagaagatgcatggcttgcagcctgatggcgtgattggcccacaa
accatgaagtggttgaacacatccgtaactgagcgccttgccttattagcgcttaatgca
gagcggattcgcttatggccaacccagcaagacagcatgattgtggtcaatgtgcccggt
tttgatatgaagtattgggatgccggccgcgaagtctttgaagccaaggttgtggtaggc
aaaaccaccaggccgacaccggtgatgaataccaaactcgattcactgatcatcaatcca
acttggaatgtgccgcataaaatcatggtggaagacatcctacccatggtgaaacgtgat
agtgagtatctcgccaatcatcatatggaaatcattcgtggttggagcgatccagaagtg
attgatcctgcgctgattgattgggaaaccgttgatccggcaaccttcccataccgtctg
cgccaacaggcaggcgtgcaaaatgcgcttgggacctataagtttaatacgcccaattca
cgcgctatctatctgcatgatacgccgagcaagcatctgtttaataacgcgtctcgggcg
ttcagttctggctgtattcgggtagaaaacgctgaaaagtttgcgcaaaccttactcgct
aatcagggcattacgctcgacgattttccagtgagcacccaagcgattgcgctcaaaaag
cgcattccagtccacatcatctatcagaccgtgtggtatgaagaaggtgtgctacattat
cgtgatgatatttatcactatgatgctttagctctcggcaatggtgacgcgtctccaaat
ttgactaaaatttga
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