Vibrio cholerae O1 O395: VC0395_A0909
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Entry
VC0395_A0909 CDS
T00520
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco03030
DNA replication
vco03430
Mismatch repair
vco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VC0395_A0909
03430 Mismatch repair
VC0395_A0909
03440 Homologous recombination
VC0395_A0909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vco03032
]
VC0395_A0909
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_A0909
Enzymes [BR:
vco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VC0395_A0909
DNA replication proteins [BR:
vco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VC0395_A0909
DNA repair and recombination proteins [BR:
vco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VC0395_A0909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
ABQ20255
UniProt:
A0A0H3AH11
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All DBs
Position
2:complement(927092..927802)
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AA seq
236 aa
AA seq
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MSAMFDSAIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAE
QDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKE
LLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIA
RRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAHHLPPHTAIQSLWL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccatgttcgattctgcgatttactggcccgctcgatttgctcacttagcccag
caggctcggcaaacccatttacagcgcttttatgctcaacctctggttgaaggctcaaca
ccgattcatcagtgctcactggttgccctcgattttgaaacaacgggactgaatgccgag
caagatgccattgtgagtatcggtttagtgccttttactactcaacggatttttcttagt
caagctcggtattggttagtaaaaccctctcaaccgcttgaagatgagtcgatagtgttc
catgggatcacgcactccgagttgcagcatgcgcaagctccagaacaggtgttgaaggaa
ttactcgaggcgctgcacggcaagattgtcgtcgtacactttaggcatattgaacgtgat
tttttgcgccagattagcctgaatatatggggcgaggcgatcgagtttcccgtgttggat
acattagaaattgaacgtcagttactggataagcaacgctcgctgtggcaacggattgca
cgtcgacctttaccctcaatacgccttgggcaatcacggatgcgttatcacttaccgccc
tactcacctcaccatgcgctgacggatgccattgcgaccgcagaactttttcaagcgcag
tgcgcgcaccatctcccaccccacaccgctattcagtctttgtggctttag
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