Vibrio cholerae O1 O395: VC0395_A1058
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Entry
VC0395_A1058 CDS
T00520
Name
(GenBank) RtxB protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VC0395_A1058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vco02000
]
VC0395_A1058
02044 Secretion system [BR:
vco02044
]
VC0395_A1058
Transporters [BR:
vco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VC0395_A1058
Secretion system [BR:
vco02044
]
Type I secretion system
RTX toxin transporter
VC0395_A1058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_16
SMC_N
AAA_22
DUF87
AAA_18
nSTAND3
ABC_ATPase
AAA_29
DEAD
AAA_5
AAA_30
RsgA_GTPase
AAA
AAA_24
Terminase_4
AAA_25
AAA_33
DUF5906
Motif
Other DBs
NCBI-ProteinID:
ABQ21791
UniProt:
A0A0H3AMN4
LinkDB
All DBs
Position
2:complement(1105160..1106266)
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AA seq
368 aa
AA seq
DB search
MAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEM
TIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTISG
AISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSI
TIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHD
FILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQA
NMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQE
LKQEEASA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttggcggttgagccgcgatttatccgacgctgggatgaacaaaccgaaaaaatggtcaca
acgggttatgacgtccagcagcttaataaccgttctaaccatttagtgcagttgctgcaa
aaaatcaccagcgtcgccattttatggttgggggcgacggaagtgctctcacttgagatg
accattggtcaactgatcgctttcaacatgatgaccaaccacattgcgcagcccttagcg
cggatggtcgagctgtggggacaatttattcaaactcgggtcgccatcgagaagctcggc
gatatgcttaacctaccagtagaacaacacacagggagtgacaatgtcactataagcggc
gctattagtttcaaaaacatcctctttcgttatcaaccggatattcctcctaccattaat
gatttgtcgctagacatccgtgcaggtgaaacattgggggtggtcggcacctcgggctca
ggcaaaagcaccctcgcccgtctgttgttgcgactttatagccctgagcaaggcagtatt
accattgacggcattccactcaatcacatcaatgttcaacagctcagacagcgagtgggt
gtggtattgcaagagaactttttatttcacaaaagcgtgagtgaaaatattgcccaatct
aagcctgaggcaagtttggaagagatcattgaggctgcaaaactctcgggcgcacatgac
ttcatcctcaaacttcccatgggttacgacacggtattagcagaaggtggtcaatcgctt
tcaggtggtcaacggcagcgtctcgcgattgcacgcacccttttatcagatccgaaagtg
ctgattttggatgaagcaaccagtgcgctggatgacgaatctcaagccgtcattcaagcc
aatatggccagcattgccagaggccgtacggtgatcacgattgctcatcgcttgtctacg
gtgcgtgattgcgatcgcatcatagtgcttcatcagggcacgattgttgagcaaggctca
caccaacaattactcgcctacggcaaacaatacaaacagttatggcagcttcagcaagag
ctcaaacaagaggaagcctccgcatga
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