Vibrio cholerae O1 O395: VC0395_A1332
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Entry
VC0395_A1332 CDS
T00520
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vco03032
]
VC0395_A1332 (topA)
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_A1332 (topA)
Enzymes [BR:
vco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VC0395_A1332 (topA)
DNA replication proteins [BR:
vco03032
]
Prokaryotic type
DNA Topoisomerases
VC0395_A1332 (topA)
DNA repair and recombination proteins [BR:
vco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VC0395_A1332 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
MetOD1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABQ22196
UniProt:
A0A0H3AP27
LinkDB
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Position
2:complement(1420330..1422960)
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AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQTATPTGKAAAASTKKAST
TDKEQQKREKERAALIKKMGVDPYHGWQANYQILPGKEKVVAELQKLAKDADSVYLATDL
DREGEAIAWHLREIIGGDEKRYKRVVFNEITKNAIQQAFKQPGELNMDGVNAQQARRFMD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDINADTLTADKQ
DFRLLVAQKDGLAFKPVNETEALAAVAALNKAQYEVCKREDKPTTSKPSAPFITSTLQQA
ASTRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVENLRGYITKHYGEAYLPSQP
NVYGSKQNAQEAHEAIRPSDVTVTADDLEGMEADAHKLYALIWNQFVACQMTPAQYDSTT
VSVKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPPVKIGDSLKLVSLDPKQHFTKP
PARYTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFFAEKMGEIVTDRLDEN
FDDLMNYDFTARMEEKLDQIAEGEVNWTAVLDEFFADFSRDLETAEQDESLGGMKPNHIV
MTNILCPTCSRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGVINVLEEDVETA
ALRAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCEGFIVEEGEFKVKGYEGPTVECDKC
GSDMVLKNGRFGKYMGCTNDACKNTRKILKNGEVAPPKEEPVHFPELPCENSDAYFVLRD
GASGLFFAASNFPKSRETRAPLVEELKRFAERLPEKYQYLTSAPAHDPDGLPAVVRFSRK
EKEHYVRTETEGKPSGWMAVYQEGKWLVTDKRKNAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactcgttatcgtcgagtcgccagccaaggctaaaaccatcaataagtac
cttggtaaagactttatcgtgaaatccagtgtgggacacgtgcgtgatctgcctacagca
gggcaaacggccacaccgaccggtaaagcggcggcagcatcgactaagaaagcatctact
actgataaagagcagcaaaagcgtgaaaaagaacgcgcagcgctgatcaaaaagatgggt
gtcgatccgtatcacggctggcaagccaattaccaaattctgcccggtaaagagaaagtg
gtggctgagctgcaaaagctcgcgaaagacgctgacagcgtttatctcgcaaccgacttg
gaccgcgagggagaagccatcgcttggcaccttcgtgagatcatcggtggcgatgaaaag
cgatataaacgagtggtatttaacgaaatcaccaaaaacgccattcagcaggcttttaag
cagcctggtgaactgaatatggatggcgtgaacgctcaacaagcacgccgtttcatggac
cgcgtggtgggctttatggtctcgccactgctgtggaaaaaagtggcgcgaggcctttcc
gctggtcgtgtacagtctgtcgccgtgaaacttctggttgagcgtgaacgcgaaatcaaa
gcatttgttccggaagaattttgggacatcaatgccgataccttgaccgcagacaagcaa
gattttcgcctgttggtggcccaaaaagacggtttagctttcaagcctgtgaacgaaacg
gaagccttggcggcggttgctgcgctcaataaagcgcagtacgaagtgtgcaaacgcgaa
gacaaaccgaccaccagtaaaccgagtgcaccttttattacgtcaaccctgcagcaagcc
gcgagtactcgccttggttatggggtgaaaaagaccatgatgctcgctcagcgtttgtat
gaagcgggttacatcacctatatgcgtaccgactcaaccaacttgagtgcggaagcggtt
gagaatctgcgtggctacatcaccaagcattacggtgaggcgtatttgccgagccagcca
aatgtgtatggcagcaagcaaaatgcccaagaggcgcacgaagcgattcgtccttcggat
gtgactgtcaccgccgacgatctggaaggaatggaagcggatgcacacaagctgtatgcc
ctgatttggaatcagtttgtggcctgtcaaatgacacctgcgcaatacgattccacgaca
gtcagtgtaaaagcggcagagtacaccctgaaagcgaaaggtcgtatcctcaagtttgat
ggttggactcgcgtacagcgcccgttgggtaaaaacgaagatcagatcctgcctccggtg
aagatcggtgatagcctaaagctcgtcagcctagatccgaaacagcactttaccaaaccg
ccagcgcgttacacggaagcggcattggtgaaagagttagaaaagcgtggtattggtcgc
ccatcgacgtatgcatcgatcatttccaccattcaagaccgcggttatgtgaaagtcgat
cagcgccgtttcttcgcggaaaaaatgggcgaaattgtcaccgatcgtcttgatgagaat
tttgacgacttgatgaactacgactttaccgcgcgtatggaagagaaactcgaccaaatc
gccgaaggtgaagtgaactggaccgcagtactggatgagttctttgctgatttcagtcgc
gacctcgaaacggcggagcaagatgaaagcttaggtggcatgaagcctaatcacatcgtg
atgaccaatattttgtgtccgacctgctcgcgtccgatggggatccgcacggcatcgaca
ggggtgtttttaggctgttctggctatgcattaccgccgaaagagcgctgcaaaaccacc
atcaacttaggtgacgaagaaggggtgatcaacgttctcgaagaggatgtcgaaaccgca
gcactgcgtgctaagaagcgttgcccaatttgtgaaacggcgatggatgcgtatctgatt
gacgataagcgtaagctgcatgtttgtggtaacaatccgaactgtgaaggctttatcgtt
gaagaaggcgagttcaaagtcaaaggctatgaaggcccaaccgtcgagtgtgataaatgt
ggctcagacatggtgctgaaaaatggccgctttggtaagtacatgggttgtaccaacgat
gcttgtaaaaatacgcgtaagatcctgaaaaatggcgaagttgcgccaccgaaagaagag
ccagtgcatttccctgaactgccttgtgaaaattcggatgcgtattttgtgctgcgtgat
ggtgcatctggcttgttctttgcggcgagcaatttccctaaatcgcgtgaaacgcgcgcg
cctttggtggaagagttgaaacgttttgctgagcgtttgccagaaaaataccagtatctg
acttctgcacccgcacatgatcctgatggcttacctgctgtggtgcgcttctctcgtaaa
gagaaagagcattacgtgcgtaccgagacagagggtaaaccttccggttggatggcggtt
taccaagagggtaaatggttggtcacggataaacgcaaaaacgcgaaataa
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