Vibrio cholerae O1 O395: VC0395_A1939
Help
Entry
VC0395_A1939 CDS
T00520
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VC0395_A1939 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_A1939 (nfo)
Enzymes [BR:
vco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VC0395_A1939 (nfo)
DNA repair and recombination proteins [BR:
vco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VC0395_A1939 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABQ21269
UniProt:
A5F5R6
LinkDB
All DBs
Position
2:complement(2069166..2070026)
Genome browser
AA seq
286 aa
AA seq
DB search
MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKK
WGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVS
EEACLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCL
DTCHTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGE
IGWECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaagttaatcggggcacatgtatcggcctctggtggtgtcgaactcgcgcca
gttcgagctcatgaaatcggagcgaatgcttttgctctcttcaccaaaaaccagcgccaa
tgggcagctaagccactggaagcgagcagcattcgtgctttcaaagccaattgtaaaaaa
tggggatttggcagtgaggcgattttgccgcacgactcttatctgattaatttaggggct
ccagaacccgagaagctcgacaaatcacgagccgcttttgtcgatgaaatgctgcgttgt
gatcagttagggttaactttgcttaactttcatcccggtagtcatttacagcaggtctcg
gaagaggcgtgtttagcgacaattgctgagtcaattaatcttgcgcatcgtcaagtaccg
aatgtgattgcggtgattgaaaataccgcagggcaggggagtaacttaggttggcgtttt
gagcatctggcggcaatcattgaccaagttgaggataaagagcgggttggcgtatgccta
gatacttgccacacctttgccgcagggtatgatttgcgtacgaaagccgcgtgtgatgag
acattcgctgagtttgagcgagtggtcggtatgcactatttgcgcgcaatgcacatcaat
gattcaaaaggtaagctggctagccgcgttgaccgccatcattccttaggtatgggagag
attggctgggagtgttttgaatatatcgcgcaagatgctcgatttaacggtatccctctg
attttagaaacgattgatcctgacatttgggcgactgagatcgcaacgctacgcaaattt
tcgacgcaaaaagagaattaa
DBGET
integrated database retrieval system
