Vibrio cholerae O1 O395: VC0395_A1988
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Entry
VC0395_A1988 CDS
T00520
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco00010
Glycolysis / Gluconeogenesis
vco00020
Citrate cycle (TCA cycle)
vco00260
Glycine, serine and threonine metabolism
vco00280
Valine, leucine and isoleucine degradation
vco00310
Lysine degradation
vco00380
Tryptophan metabolism
vco00620
Pyruvate metabolism
vco00630
Glyoxylate and dicarboxylate metabolism
vco00640
Propanoate metabolism
vco00670
One carbon pool by folate
vco00785
Lipoic acid metabolism
vco01100
Metabolic pathways
vco01110
Biosynthesis of secondary metabolites
vco01120
Microbial metabolism in diverse environments
vco01200
Carbon metabolism
vco01210
2-Oxocarboxylic acid metabolism
vco01240
Biosynthesis of cofactors
Module
vco_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vco_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vco_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vco_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VC0395_A1988 (lpdA)
00020 Citrate cycle (TCA cycle)
VC0395_A1988 (lpdA)
00620 Pyruvate metabolism
VC0395_A1988 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
VC0395_A1988 (lpdA)
00640 Propanoate metabolism
VC0395_A1988 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VC0395_A1988 (lpdA)
00280 Valine, leucine and isoleucine degradation
VC0395_A1988 (lpdA)
00310 Lysine degradation
VC0395_A1988 (lpdA)
00380 Tryptophan metabolism
VC0395_A1988 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VC0395_A1988 (lpdA)
00670 One carbon pool by folate
VC0395_A1988 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vco04147
]
VC0395_A1988 (lpdA)
Enzymes [BR:
vco01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VC0395_A1988 (lpdA)
Exosome [BR:
vco04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VC0395_A1988 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
NAD_binding_8
FAD_binding_2
Thi4
AlaDh_PNT_C
HI0933_like
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
ABQ20695
UniProt:
A0A0H3AKF3
LinkDB
All DBs
Position
2:complement(2134524..2135951)
Genome browser
AA seq
475 aa
AA seq
DB search
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFT
GPNTIEVEGEEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKSAPAQAERYDAVLVAIGRVPNGKLLDAEKAGLEVDERGFIRVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagtcgtggtgcttggtgccggtcctgctggttactcc
gccgcattccgctgtgcagacttaggtctggataccgtcatcatcgaacgttacaacacg
ctaggtggtgtgtgtttgaacgttggttgtattccttctaaagcactgctgcacgtggca
aaagtgattgaagaagccaaagcgctgactgagcacggtatcgtgtttggcgagccaaag
acagacatcgacaaagttcgtctgtggaaagaaaaagtgatcaatcagctgaccggtggt
ctggctggtatggcaaaaatgcgtaaagtgaacgtagtgaacggctacggtaaattcacc
ggcccgaacactattgaagtggaaggcgaagagggcaaaactgtcgtaactttcgataac
gcgatcgttgctgcaggttctcgtccaatcaaactgccattcattccgcatgaagaccca
cgtatttgggattcaactgatgcgctggaactgaaagaagtgcctggaaaactgctgatc
atgggcggcggtatcatcggcctggaaatggcgaccgtttaccattcactgggttctaaa
attgatgtagttgagatgtttgaccaacttatccctgctgcggataaagacatggttaaa
gtctataccaaacgcatcaaagataagttcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagagcgcaccagcacaa
gctgagcgttacgatgcggttctggttgcaattggccgtgtaccaaacggtaaactactg
gatgctgagaaagcgggtctggaagtggacgagcgtggctttatccgcgtggataagcaa
atgcgcactaacgttccgcacatcttcgcgatcggtgacatcgtgggtcaaccaatgcta
gcacataaaggcgtgcatgaaggccacgtagcggcagaagtgatctctggtaagaagcac
tacttcgatccaaaagtgatcccatccatcgcttacactgagccagaagtggcttgggtt
ggtaagacagaaaaagaagcaaaagcagaaggcatcaactatgaagttgctactttccca
tgggcagcctctggccgtgcgattgcttctgactgtgcagacggtatgactaagcttatc
ttcgataaagagactcatcgtgtgatcggtggtgctatcgtaggtactaacggtggtgaa
ctgttgggtgaaatcggtctggcgatagagatgggctgtgatgcagaagacatcgcactg
accattcatgctcacccaacgctgcatgagtctgtgggtctggccgctgaagtcttcgaa
ggcaccatcactgacctgccaaacgccaaagcgaaaaagaaaaaataa
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