Vibrio cholerae O1 O395: VC0395_A2030
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Entry
VC0395_A2030 CDS
T00520
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vco03009
]
VC0395_A2030 (rumA)
Enzymes [BR:
vco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VC0395_A2030 (rumA)
Ribosome biogenesis [BR:
vco03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC0395_A2030 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Cons_hypoth95
Methyltransf_11
MTS
Methyltransf_4
PrmA
DOT1
Ubie_methyltran
FtsJ
Methyltransf_23
Methyltransf_12
Methyltr_RsmB-F
Ribosomal_L22
Motif
Other DBs
NCBI-ProteinID:
ABQ21286
UniProt:
A5F5I8
LinkDB
All DBs
Position
2:complement(2186285..2187607)
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AA seq
440 aa
AA seq
DB search
MARFFQPKKHSTLDTKHQPVTIERLDHQGSGLAFLHKKPLFVDGALPGEEVLIQLTENKS
KYARGQLIKVLKPSAERVAPFCAHYAQCGGCDLQHLDRAGQIHHKQQALSQLMVKFAGQS
LALSAPVCSDDQGYRRRARLSLMWDKKTQQLQLGFRRKQSKAIVNVTDCPVLEPSLNALL
PDLNALLSEWSQPERLGHVELVKGDNTRVLVLRHLGALIEQDQQRLTDFASQNQLTLYLM
LEAGELQHVQGEAPYCEETGSRLSFLPSHFIQVNRAVNQHMVAQALNWLEVSPQEHVLDL
FCGLGNFTLPLAKQAQAVVGVEGVDEMVQHATHNAKLNQINNVAFYQANLEQDMTSASWA
QQKFAKVLLDPARAGAEGIVDQLSALGAKRVVYVSCNPATLARDSQSLLSQGFRLEKLGM
LDMFPHTSHLESMALFVKKG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttcaaccgaaaaagcacagcacgttagacacaaagcatcagccggtc
actattgaacggttggatcaccaaggcagcggactggcctttttacacaagaaacccttg
tttgttgacggcgctttgccgggggaagaggtgctgattcagctcactgaaaacaagagc
aaatacgcgcgcggtcaactgattaaagtgttgaaacccagcgctgagcgtgttgcacct
ttctgtgcgcattatgcgcaatgtggtggttgtgatttacagcatcttgaccgagcggga
caaatccatcacaagcagcaagccttaagtcaattaatggtgaagtttgcagggcagagt
cttgctctgtctgcgccagtttgttctgatgatcaaggctaccgtcgtcgcgcacgctta
agcctgatgtgggataagaaaactcagcaactacaattgggttttcgccgcaagcagagc
aaagcgattgttaatgtgaccgattgccccgtgctggagccgagtttaaatgcgctgttg
cctgatttgaacgctttgttgagtgagtggagtcaacctgagcggttggggcatgtcgaa
ttggtgaaaggggataacactcgcgtgttggtgctgcgccatttaggcgcgctgattgag
caagatcagcagcgtttgactgactttgcttcgcaaaaccaactaaccttatatctgatg
ctggaagccggcgagttgcaacatgtgcaaggtgaagcgccatactgtgaagaaacaggc
agccgcttaagtttcttgcccagccattttattcaggtcaatcgcgcggtgaatcagcac
atggtcgcgcaagccttgaattggcttgaggttagcccacaagaacacgtgctcgatctc
ttctgtggcttaggaaatttcacgctgccgctggccaaacaagcgcaagcggtggtgggt
gttgaaggtgttgatgagatggtgcaacacgccactcataacgcgaaattgaaccaaatc
aataatgtggcgttttatcaggccaatttggaacaagatatgacgagcgcctcatgggcg
cagcagaaatttgctaaagtactgctcgacccagcccgcgcaggcgcagaagggattgtg
gatcaactctctgcgttaggtgccaagcgggttgtgtacgtgtcgtgtaaccctgcgaca
ttagcacgagacagtcaaagcttgctgagccaaggatttcgcttagagaaactggggatg
ctcgatatgttcccgcacaccagtcatctcgagtccatggctttgtttgtgaaaaagggc
tag
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