Vibrio cholerae O1 O395: VC0395_A2125
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Entry
VC0395_A2125 CDS
T00520
Name
(GenBank) conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vco02000
]
VC0395_A2125
Transporters [BR:
vco02000
]
Other transporters
Pores ion channels [TC:
1
]
VC0395_A2125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
T2SSN
Motif
Other DBs
NCBI-ProteinID:
ABQ21509
UniProt:
A0A0H3AM15
LinkDB
All DBs
Position
2:complement(2280202..2283966)
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AA seq
1254 aa
AA seq
DB search
MIKRALKWTKWLSMSLLVLVILLVLALAGALFTNPGLHAVLWGAQQALPQLKVEQAQGAL
FPRFTLQGVDYADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKLDLPSLAESE
PTPDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQT
EWQGIRLALAESEASTEPEAVQAATSDSAEPLQLPDVMIPLHIELARFDIRDFRLEQETP
IIVNHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPIQLELRSQVHLADFKG
QTLSLVAQGSLADLTVQANLDSLAQAQLNSHFNLLDADIPFDLQLSQVKAQWPMLGEGDY
HVEVPELSIQGSLAKYQFALQGALQGKDLPNVSLALQGHGNLDEVALQSLKVDTLGGLVT
GNAVANWKNPLNWAARLNLKNIQPGLQWPEAEGKISGELDTSGALTEQGGWQVEVSRLAI
KGVLRDYPLKMLGELSASDVQGQGDIALQTKGVSLVHGPNSLTAKGQLSKQWRMSVELDV
PDLSKSLPDAKGKVIGDVLLRGDLKQPRVKLVLDADSLQWQELGSIGHVTLQGNLVPLPE
PQGELTLQVRDIQYQDQRIDTVDLKAQGSQRKHEVTLDVTSDLASTSLAMNGRLRTEPTL
RWQGELERMWLNSPQGQWLLQQATALSFDQRMERVTVAAHCWVQGEASLCLEEEAELGAR
GEARLAIKQFDFKQLAGVLPKETKLSGGLNGQVCAKWAPKAAPQLQANLELTQGQVTQKL
NKSVTFGWDKAQFSAQLAKNQLQASWLLDATDNGDLSGNIQIADVRAEQKTMLGSLNLTT
FNLDFLQPLIGELSEAKSNINADVQFHGPMLHPQLNGEIAINDIRVKGEISPVDVQSGQV
SLKFNGYQAVLNADIQTTDGLLEVDGDADWQQIEDWRLKARVHTPSMMVELPPMVRVKVI
PDLTLTMQPQLARVTGNIALPWGRIVVEELPPSAIGVSKDQILLNADFEPLTDKERIPFS
VESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQKDKGPFILGEVNIRNGQYRSFGQDLQIK
EGKILMNGPVDQPYLAITAIRNPNNTQDGVVAGVRVSGPSDEPSLTIFSEPAMPQANALS
YLLRGQNIDGEAGGNAMTTTLIGLSLAQSGKLVGEIGQAFGVQDLQLDTAGSGDDSQVTV
SGYILPGLQVKYGVGIFNSVGEFTVRYRLMQDLYLEAVSGVDSAVDLLYQFEFN
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgggcgttaaagtggaccaaatggctctctatgtcgctgttggtgttagtg
atcttgctggtgctggctttggcgggggcgctgtttaccaaccccggtttgcatgcggtt
ttgtggggcgcgcagcaagcattgccgcagttgaaagtggagcaagcgcagggtgcactg
tttccgcgttttactttgcaaggggtcgattatgcggatagtgagcttaatctgagcttt
tctgtgcaaaagctaagcttggcgattaaccccaactgcttattggaacccagtatctgt
atcaatgagctggcgctatctggagtcaagttagatctcccctcattagcagagagtgaa
ccgacacctgatgagcccgattctgagccgctgggagacatttccacgcccatcccgatt
cgcttaggtcagttagcgctacaagatattgaattaaatattctgggtaaccgagtggcg
tggcagcaattgaccacgcgagcgtcttggcaaggcaatcgcctgcgtatcgggcaaacc
gagtggcaggggatccgtcttgcgttagcggagagtgaagcctcaaccgaacccgaggcg
gttcaagcggcaacctctgatagcgcagaacctttgcaactgccagatgtgatgatcccg
ctgcacattgagttagcgcgtttcgatattcgtgattttcgtttagaacaagagacgccg
atcatcgtcaatcatctagctttgcaagcgactgccgcgcagcacgacgtctctatctct
agtcttgagctgagcatgccggagctggatgcgcaattgaacgcacaagcgacgctcagt
caagattatcccattcagttagaactgcgcagtcaagtgcatcttgctgattttaaaggc
caaacattatcactggtcgcgcagggtagtcttgcggatctcactgtacaagccaatcta
gactcgttagctcaagcgcagttgaacagccactttaatctgctggatgccgatataccg
tttgatctacaactgagtcaggtgaaagcgcagtggcccatgttgggggaaggggattat
cacgttgaggttccggagttaagcattcagggctccttggccaagtatcagttcgccttg
cagggtgcgttacagggcaaagatttaccgaatgtgagtttagccctgcaagggcatggc
aatctggatgaagtcgcgttgcaatcacttaaagtcgatacgcttggcggcttagtgacg
ggcaatgctgtggcaaattggaaaaatccgctcaattgggccgctcggttaaacctgaaa
aatattcagcccggtctgcaatggcctgaagcagaaggcaagatcagtggtgagcttgat
acctctggcgctttgactgagcaaggtggctggcaagtggaggtttcacgcttagccatt
aaaggggtattacgtgattatccgcttaaaatgttaggcgaactcagcgcctccgatgtc
caagggcaaggggatatcgcgttacaaactaagggagtttccttagtgcatgggccgaac
tccctcaccgctaaaggtcagttgagtaagcagtggcggatgtcggtggagttggatgta
ccggatttgagtaaatccctgcccgatgcgaaaggcaaagtgattggcgatgtgctgctg
cgaggtgatctcaaacagccacgggtcaaattggtgctggatgctgatagcttgcaatgg
caagagttaggctcgattgggcatgtcactttgcaaggaaatctcgtgccactgcctgag
cctcaaggcgagctcaccttacaagtgcgcgatattcagtaccaagatcaacgaattgat
actgttgatttaaaagcacaaggctctcagagaaaacatgaggtgacactcgatgtcacc
tctgatctcgcttcgaccagcttggcgatgaatggccgattgcgtactgaacccacactg
cgctggcaaggtgagctggagcgcatgtggttaaattcaccgcaagggcaatggttatta
caacaggcgaccgctctctcgtttgatcagagaatggagcgcgtgaccgtcgccgctcac
tgttgggtgcaaggggaggcttcgctctgtttagaagaagaggccgagttaggggcgcgg
ggtgaggcgcgcttagcgattaagcagtttgattttaagcagctcgccggtgtcctgcct
aaggaaaccaaactcagtggcggtttgaatggccaagtgtgtgctaagtgggctccgaaa
gcggcgccgcagttgcaagccaatcttgagttaacccaaggtcaggtgacgcaaaagctg
aataaaagcgtgacgtttggttgggataaagcgcaattttctgcccaattggcgaaaaat
cagctgcaagccagttggttattagatgcaaccgataatggtgatctctcgggcaatatc
caaattgccgatgtgcgtgctgaacagaaaaccatgctcggttcacttaacttaaccacg
tttaatctggatttcttgcaaccgttgattggtgaacttagtgaagcgaaatccaatatt
aatgccgatgtacaatttcatggcccgatgctgcatccgcaattgaacggtgaaattgcg
atcaatgatattcgcgtaaaaggtgagatctcgccggttgatgtgcaatccggtcaagtg
tcacttaaatttaatggttatcaggcagtgttaaatgctgatatccagaccaccgatggt
ttgctggaagtcgatggtgatgccgattggcaacagatagaggattggcgactcaaagcg
cgagtgcatactccctcaatgatggttgagctgccacctatggtgcgagtcaaggtgatc
cctgatttaaccttgaccatgcaacctcaactggcacgagtgacgggtaatatagcgctg
ccgtgggggcggattgtggtcgaagagttaccgccgagcgcgattggggtatcgaaagat
caaattttgctgaatgcggattttgagccactgactgacaaagagcggatcccgttcagt
gtggagagtgacgtcaatgtgcaaattggcgacgatttccaactcagtgcttttggtcta
caaggtaacttagtcggacgtctcaatgtagcgcaaaaggataaagggccgtttattttg
ggtgaggtgaacattcgcaatggtcaataccgctcatttggacaagatctgcagatcaaa
gaagggaagatcttgatgaatggcccggtggatcagccgtatttggcgatcacggcgatc
cgtaatcccaacaacacgcaagatggcgtggttgctggggtgcgagtcagtggaccctcg
gatgagccgtcactcaccatcttctctgaacctgcaatgccacaagccaatgcgctgtcg
tatttgttgcgtggacaaaatattgatggggaagccgggggcaacgccatgaccaccacc
ttgattggtctgagtttagcgcagagcggtaaactggtcggcgagataggccaagcgttt
ggtgtgcaggatctgcaactggatacggcaggttctggggacgattcgcaggtcacggtc
agtggttatattctgcccggcttgcaagtgaaatatggtgtaggtatttttaactcagtc
ggcgaatttactgtgcgttatcgcttgatgcaggatctgtatttggaggccgtctccggt
gtcgacagcgccgtagatctgctctatcagttcgaatttaactaa
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