Vibrio cholerae O1 O395: VC0395_A2506
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Entry
VC0395_A2506 CDS
T00520
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco03030
DNA replication
vco03430
Mismatch repair
vco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VC0395_A2506 (dnaN)
03430 Mismatch repair
VC0395_A2506 (dnaN)
03440 Homologous recombination
VC0395_A2506 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vco03032
]
VC0395_A2506 (dnaN)
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_A2506 (dnaN)
Enzymes [BR:
vco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VC0395_A2506 (dnaN)
DNA replication proteins [BR:
vco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VC0395_A2506 (dnaN)
DNA repair and recombination proteins [BR:
vco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VC0395_A2506 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABQ21179
LinkDB
All DBs
Position
2:complement(2659354..2660454)
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AA seq
366 aa
AA seq
DB search
MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE
GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPNIE
DWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVA
QAQLGADFAQKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLVDGR
FPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNPEQE
EAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENVDDDSAMYV
VMPIRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccattgaacgtagccacttgattaaaccattgcagcaggtgtctggcact
ttaggtggtcgcgccagcttgccgatcttgggtaatttgttgctcaaggtggaagagaat
caactgtcgatgaccgccaccgatttggaagtggaactgatcagccgtgtgacgttagaa
ggtgaatttgaagcaggcagtattaccgttcctgcgcgtaagtttttagatatttgccgt
ggtttgcccgatagtgcggtgatcactgtgctgcttgaaggcgatcgcattcaagtgcgt
tctggtcgtagccgtttctcactcgccaccttacctgccagtgattttccgaacattgaa
gattggcaaagtgaagtgcaagtttcgctcactcaagcggaactgcgtggcctgattgag
aaaacgcagttttctatggccaaccaagatgtacgctactacttaaacggcatgctgttt
gaaattgatggcaccaccttgcgttctgtggcgactgatggtcaccgtatggcggtggcg
caagctcagctcggtgcggattttgcgcaaaagcagatcattgtgccgcgtaaaggggtg
cttgagctggtgaaattgcttgatgcgccagagcaacctgtggtgctgcaaatcggccac
tctaacttgcgtgcagaagtgaatcactttgtgtttacttcgaagctggttgatggtcgt
ttccctgattatcgccgtgtattgccgcaacataccagcaaaacactacaaacgggctgc
gaagagttacgccaagcattttcgcgtgccgcgattctatcgaatgaaaaattccgtggt
gtacgggttaatttggctgacaacggaatgcgcattaccgccaataacccagagcaagaa
gaagcggaagagctactggatgtgagctttgaaggcgagccgattgagattggctttaac
gtcagctatatcttggatgtgcttaacaccctgcgctgcgacaatgtgcgcgtttcgatg
tcggatgccaacgccagtgccttggtggagaatgtcgatgatgacagtgccatgtacgtg
gtcatgccaattcgtctgtaa
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