Vibrio cholerae O1 O395: VC0395_A2534
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Entry
VC0395_A2534 CDS
T00520
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco00071
Fatty acid degradation
vco00280
Valine, leucine and isoleucine degradation
vco00310
Lysine degradation
vco00362
Benzoate degradation
vco00380
Tryptophan metabolism
vco00410
beta-Alanine metabolism
vco00640
Propanoate metabolism
vco00650
Butanoate metabolism
vco00907
Pinene, camphor and geraniol degradation
vco00930
Caprolactam degradation
vco01100
Metabolic pathways
vco01110
Biosynthesis of secondary metabolites
vco01120
Microbial metabolism in diverse environments
vco01200
Carbon metabolism
vco01212
Fatty acid metabolism
Module
vco_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VC0395_A2534 (fadB)
00650 Butanoate metabolism
VC0395_A2534 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VC0395_A2534 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VC0395_A2534 (fadB)
00310 Lysine degradation
VC0395_A2534 (fadB)
00380 Tryptophan metabolism
VC0395_A2534 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VC0395_A2534 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VC0395_A2534 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VC0395_A2534 (fadB)
00930 Caprolactam degradation
VC0395_A2534 (fadB)
Enzymes [BR:
vco01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VC0395_A2534 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VC0395_A2534 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VC0395_A2534 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VC0395_A2534 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABQ19542
UniProt:
A5F465
LinkDB
All DBs
Position
2:complement(2685981..2688152)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAKTLQVKQLANGIAELSFCAPASVNKLDLHTLESLDKALDALAADSSVKGLLLSSD
KEAFIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCEC
VLATDFRIGDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALK
VGLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGMV
AQVAGKHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYIK
GLAKQSAKAASQDTQHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKL
LNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVD
AETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGK
PKKAFSDDVLAILAPVCGAPQNFDPQTLIERTMIPMINEVVLCLEEGIIASAQEADMALV
YGLGFPPFRGGVFRYLDTIGIANYVAMAEKYADLGALYQVPQLLKNMAQQGTSFYSAQQA
SAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccaaaaccctacaggtaaagcaactcgctaatggaattgccgagctc
tctttctgtgctcctgcttccgttaacaaactggatttacacacactggaatccctcgat
aaagcgttagatgcgctcgctgccgattccagtgtcaaaggcctcctactcagctcagat
aaagaggcttttatcgtcggcgctgatatcaccgaatttctcgggctatttgccaaaccg
gaagcagaattggatgagtggttgcagtttgccaatcgcatttttaacaagttggaagat
ttacctttccccaccttgtcagcgttaaaaggccacacacttggcggcggctgtgaatgt
gtactcgccaccgattttcggattggtgatgccaccaccagcattggcttgcctgaaacc
aaactgggcatcatgccgggatttggcggcaccgtgcgtctgccacgtttgattggtgct
gatagcgcgatggaaatcatcacccaaggtaaagcgtgccgcgcggaagaagccttaaaa
gtgggattactggatgcgattgtcgatagcgacaaactgatcgattccgcaatcaccact
ttgactcaagcgattgaagaaaaactggattggcaaaaacgccgtcagcagaaaacctca
gcgctgactttaagcaagctggaagccatgatgagctttaccatggcaaaaggcatggtg
gcgcaagtggcaggcaaacactatccagcaccgatgacatctgtcgtgaccattgaagaa
gcggcgcgtttaccacgcgatgctgcgctggatatcgagcgcaaacacttcatcaagctc
gcaaaatctaccgaggcgcaagcactggttggtattttcctcaatgatcaatacatcaaa
ggcttagccaaacaatccgcgaaagcggcaagccaagacacccaacacgccgccgtgctc
ggcgcgggcattatgggtgggggcatcgcgtatcaatcggctctcaaaggcgtacctgtg
ctgatgaaagacatcgcaccgcactctttagagttgggcatgaccgaagcggccaagctc
ctcaacaaacagttagagcgcggcaagatcgatggattcaaaatggctggtattctggct
tccatcaccccttctctgcattacgcagggattgatcaggcggacgtgattgtcgaagcc
gtggtggaaaatccgaaagtcaaagccgcggtactgagcgaagtggaaggattggtcgat
gcagaaacgattctgacctccaacacctcgaccattcccattaacctgctcgccaaatca
ctcaagcgcccacagaacttctgcggtatgcacttctttaaccctgtgcatcgcatgcct
ttggtggaaatcatccgtggtgaacacacctcagaagacaccatcaaccgagtggtggct
tatgcggcgaaaatgggcaaatcaccgattgtggtcaatgactgcccaggattcttcgtt
aaccgcgtactcttcccttactttgcaggctttagcctactgatgcgtgatggtgctaac
ttcaccgaaatcgacaaagtgatggagcgtcaattcggctggccaatgggcccggcgtat
ttgcttgatgtggtcggcattgatactgcacaccatgctcaggcagtgatggccgaaggc
ttcccaactcgcatggccaaatctggccgagaagcgattgatgccctgtacgaagcgaaa
aaatttggccagaaaaatggcagcggcttctatcagtacaccgttgataaaaaaggcaaa
ccgaaaaaagccttcagcgatgacgtgctcgccattcttgcgcctgtatgcggcgcacca
caaaactttgacccacaaacccttatcgaacgcactatgattccgatgattaatgaagtg
gtgctctgtcttgaagaagggatcatcgcctccgcgcaagaagctgacatggcgttggtg
tacggtcttggcttccctccgttccgtggtggtgtatttcgttacctagataccataggc
atcgccaactatgtggctatggcggaaaaatacgctgacctcggcgcgctctatcaagta
ccgcaactgctgaagaacatggcgcaacaaggaacatctttctacagcgctcagcaagcc
agtgccctgtaa
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