Vibrio cholerae O1 O395: VC0395_A2812
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Entry
VC0395_A2812 CDS
T00520
Symbol
uvrA
Name
(GenBank) excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VC0395_A2812 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vco03400
]
VC0395_A2812 (uvrA)
DNA repair and recombination proteins [BR:
vco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VC0395_A2812 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VC0395_A2812 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_25
NACHT
AAA_23
nSTAND3
APS_kinase
Viral_helicase1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ABQ21146
UniProt:
A0A0H3AKK3
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All DBs
Position
2:complement(2959741..2962563)
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AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID
GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD
GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLS
LAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYI
NDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARNV
FINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLMQTLTHLRNLGNTV
LVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP
EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTA
LNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYQPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK
GKTIDEVLDMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI
IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatcgaagtacgcggcgctcgtacccataacctcaaaaatatcaatctgacc
attcctcgtgacaaattgattgtcatcaccggcctctctggttcaggtaaatcctcactg
gcttttgatacgctgtacgcagaaggtcaacggcgttatgtcgaatcactctcggcttat
gcgcgccaattcctttctctgatggaaaagccggatgtagaccatattgaggggctttca
cccgcgatttcgattgagcagaagtccacttcccataacccacgctctactgtgggtacg
attacggaagtgtatgactatttacgtctactctacgctcgggttggtgagccacgctgc
cccgaacaccaagtgccactgaaagcgcaaaccatcagtcagatggtagacaaagtattg
gaattgccagaaggcagcaaaatgatgctgctggcaaccatagtcaaagagcgcaaaggc
gaacacgttaaaacattggaaaaccttgctgcgcagggctttattcgtgcgcgtatcgat
ggtgaaacctgcgatctgaccgatccaccgaaactcgaactgcacaaaaagcataccatt
gaagtaattgtcgaccgtttcaaagtgcgcagtgatctgcagcaacgcttagccgaatcc
tttgaaaccgccttggaactttccggcggtatcgtcgttgtcgccccgatggaaggcgat
ggcgaagagcagattttctcggctaactttgcttgtccacattgcggttacagcatgcgc
gaacttgaaccacgcctgttctccttcaacaacccagccggtgcttgtccaacctgtgat
ggtttaggagtacagcagtatttcgatccagatcgagtgattcaagatgccaatttaagt
ttggcacaaggtgcgatccgcggttgggatcaaaagaacttttattatttccagatgctg
actgcactggccgagcactacgattttgatgtacacacgcccttcaataagctgagcaaa
aagattcaggaaatcattctgcacggctctggtcgcaccgaaattgaatttaagtacatc
aatgatcggggtgatattcgccttaaaaaacatccttttgaaggaattttgcataatttg
gagcgccgctatcgcgataccgaatccaactcggtacgtgaggagctggcaaaatacatc
tccaacaagccttgcagcagctgtgatggtacgcgcttaaaaatcgaagcacgcaatgtg
tttattaatgatactgcgctgccaacgattgtagaactgagcattgctgatgcgctaacg
ttcttccaagagctcaaactggaaggccaacgtgcacaaatcgctgaaaaagtgatgaaa
gagattaatgaccggctgcaatttttggtcaatgtcgggctcaattacttaaatctctcg
cgcagcgccgagacgctttccggtggcgaagctcagcgtattcgtctagccagtcagatt
ggtgcgggtttagtcggtgtgatgtatgtccttgatgaaccctcgattggcctccaccaa
cgcgacaacgaacgcttgatgcaaaccctcacccacttacgcaatctagggaataccgtg
ttagtggttgagcatgatgaagatgcgattcgcatggcagatcatgtgattgatattggc
ccaggtgctggcgtacacggcggcatggtggttgccgaaggcaatgtggaggaaatcatc
gccaatccaaactcactcacaggtcaatatctcagtggcgtgaaaaaaatcgcggtacca
gagcagcgcacaccaaaagatgcgaagaaaacggtagagcttaaaggcgcagtcggtaat
aacttaaaaaatgttgacctgtctattcctgttggcctgtttacttgtgtgacgggcgtt
tcaggttcgggaaaatccactctgatcaacgataccttctttaagattgcccatacagca
ctcaatggcgcgacgacggcgacacctgcgccttatcgctccattcaaggtctagaacac
tttgataaagtgatcgatatcgatcagagcccaattggtcgcactcctcgctccaaccct
gccacttacaccggaatcttcactccaatccgtgaattatttgcaggaacacaagagtct
cgctcgcgtggttatcagccgggacgctttagttttaacgtccgcggagggcgctgtgaa
gcgtgccaaggcgatggcgtgatcaaagttgaaatgcacttcttacccgatgtgtatgtg
ccttgtgatgtgtgtaaaggtaaacgctataaccgagaaacactggaagtgcgctacaaa
ggcaagacgattgatgaagttttggacatgaccgttgaagacgcacgcgagttttttgac
cccgtacctgtgatagcacgtaagctgcaaaccttgatggatgttggattgtcctacatt
cgtcttgggcaatcagccaccaccttatcaggaggtgaagcgcagcgggtaaaattagcg
cgtgaactctccaaacgagatacgggcaaaaccctgtatattttggatgaaccaaccacg
ggcctacacttccacgatattcagcaactattgagcgttctgcaccgcttgcgtgaccat
ggcaataccgtggtggtgattgagcataacttggatgtgatcaaaacggctgactggatc
atcgatttaggccccgaaggcggccaaggcggcggactgattattgcagaaggaacacca
gaagatgtggcgcagatcgaagcttcacataccgcacgtttcctcaagcctttgttgaat
tag
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