Vibrio cholerae O1 O395: VC0395_A2816
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Entry
VC0395_A2816 CDS
T00520
Symbol
mshH
Name
(GenBank) MSHA biogenesis protein MshH
KO
K18765
RNase E specificity factor CsrD
Organism
vco
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vco03019
]
VC0395_A2816 (mshH)
Messenger RNA biogenesis [BR:
vco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VC0395_A2816 (mshH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ABQ20565
UniProt:
A0A0H3AHQ6
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All DBs
Position
2:2965348..2967369
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AA seq
673 aa
AA seq
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MAQMRYTPTLKLSTRLVAFVTMTVISAMFILFLGGTLSFQRLGQEYLNHYLQGIVEVVDK
EMEDPDAAYSMQRWMPKMLQASGIIEMQLTSEAGPIYRFKDTTNTIEASRLHQVALPLKR
NPGYVMHFKAVPPYLNYNYSLQAMWSTTLAVLLIVFFLIRGLKWLKEQLLGSELLEERGR
MILAGRVEQHAKGDPREWPFTASEALDRLIEELQDARQERSRFDTFIRSQTFLDQLTGTA
NRVLYDSKLESALLESGAHGGVMMLRVDDLESAREESPKRTLDEFIIEVGECLSNIVQRY
PDAILSRYYEDVFALFIPHQGSKDIAQVATQAIKLIERINPPEPLPEDNWFHIGVTMYQE
GERRGRIIDEMETALKSAQLQGVNAWSRFQKPKQLQEDRGSVRWRTLFEQVLRPEEILLY
RQACYRISANGEREFLHYELFARIQDPQQGILKASRFSSALETVGYEAMLDRAVFSSVVS
FLKRSELVEPLSVNLHVVPFNDKRYARWIRNELMQMPFSLRTALSFEFSEAHLVNHLDYM
RPIIRMLAGLGCKIVVGQAGRTIVSTHYIKDLKVNYLKLHRSLIKKIDQRHENQLFVRSL
VGVCGGTQAEVVAVGVETTQEWQTLQMLGVSGVQGRLFDEEQQMLPPLPPEPLKRPPRLS
VKPIGKRNRWRTK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaaatgaggtatacaccgacattaaaactgagcactcggttagtggcgttcgtc
actatgacggtgatcagtgccatgtttatcctgttccttggtggcaccttatcttttcag
cgtttggggcaggaatacctcaaccactatctacaagggatagttgaggttgtcgataag
gagatggaagatccagacgccgcttactctatgcagcgttggatgcccaaaatgcttcaa
gcgagtggcatcattgaaatgcagcttacttccgaagcgggccccatctaccgttttaaa
gacaccaccaacaccattgaagcttcacgtttgcatcaagtcgctttaccgctcaaacgt
aatcccggttatgtgatgcattttaaagcggtgcctccctacctcaattacaactattca
ctgcaagccatgtggtcgaccaccttagcggtgctactgatcgtatttttcttgatccgc
ggtctgaaatggttgaaagagcaactactaggatcggagttactggaagagcgaggacgg
atgattcttgctggacgagtggagcaacatgccaagggggatccgcgagagtggcctttc
accgcaagtgaagccttagatcgcttgattgaagagttgcaagatgcccgtcaagaacgt
agccgttttgatacctttattcgtagccaaaccttcctcgatcaactgaccgggacggcg
aatcgggtgttgtatgacagtaagctggaatcggctttactggagagtggcgctcacggc
ggcgttatgatgctgcgggtcgatgacttagagtcagcgcgagaagagagccctaaacgt
acgctcgatgagtttatcattgaggtgggggagtgtttatccaacatagtacagcgttat
ccggatgccatactttctcgctactatgaggatgtgtttgcgctgtttattcctcatcag
ggtagtaaagatattgctcaagtagcgacacaggcgattaagttgattgagcgcatcaat
ccccctgagccactgccagaagacaattggttccacattggtgtaaccatgtatcaagaa
ggtgagcggcgtggacggattattgatgagatggaaaccgcgctcaaaagtgctcaactg
caaggggtgaatgcgtggagccgttttcaaaaacctaaacagttacaagaggatcgcggt
agcgttcggtggcgtacattgtttgaacaggtgcttcgtccggaagagattttgctctat
cgccaagcctgttatcgtatttctgctaatggagagcgggagttcctacattatgagtta
tttgcgcgtattcaggatccgcaacaaggcattctcaaagcgtcgcgttttagctcagct
ttagaaacggtcggctatgaagccatgttggatcgtgccgtattcagctctgtcgtgagt
tttttgaagcgctctgaactggttgaaccactctcggtaaacttgcacgttgttccattt
aacgataaacggtatgctcgctggattcgcaacgaattgatgcagatgcctttttctctt
agaacggcgctctcttttgagttttcagaagcgcatttggtcaaccatttagactatatg
cgccccatcattcgcatgttggcggggctgggttgcaagatagtggtgggacaagcggga
cgaacaattgtcagcacgcactatatcaaagacttaaaagtcaactatcttaaacttcat
cggagtttgataaagaaaattgaccaacgccatgaaaatcagctgttcgttcgcagtttg
gtaggtgtatgtggcggtacccaagcagaagtggttgcggttggggttgaaactactcaa
gagtggcaaaccttacagatgctgggtgtcagtggtgtgcaaggtcgcttgtttgatgag
gagcaacagatgttgcctcctttgccaccagagccattgaaacgccccccgcgtctctct
gtaaagcccatcggcaaacgtaatcgatggcgaaccaaatag
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