Vescimonas coprocola: MM50RIKEN_00230
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Entry
MM50RIKEN_00230 CDS
T07634
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MM50RIKEN_00230 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcop03019
]
MM50RIKEN_00230 (groL)
03110 Chaperones and folding catalysts [BR:
vcop03110
]
MM50RIKEN_00230 (groL)
03029 Mitochondrial biogenesis [BR:
vcop03029
]
MM50RIKEN_00230 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcop04147
]
MM50RIKEN_00230 (groL)
Enzymes [BR:
vcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MM50RIKEN_00230 (groL)
Messenger RNA biogenesis [BR:
vcop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MM50RIKEN_00230 (groL)
Chaperones and folding catalysts [BR:
vcop03110
]
Heat shock proteins
HSP60 / Chaperonin
MM50RIKEN_00230 (groL)
Mitochondrial biogenesis [BR:
vcop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MM50RIKEN_00230 (groL)
Exosome [BR:
vcop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MM50RIKEN_00230 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MM50RIKEN_00230 (groL)
Exosomal proteins of breast cancer cells
MM50RIKEN_00230 (groL)
Exosomal proteins of colorectal cancer cells
MM50RIKEN_00230 (groL)
Exosomal proteins of bladder cancer cells
MM50RIKEN_00230 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HAD_2
DHFR_1
NNH2
SurA_N
Motif
Other DBs
NCBI-ProteinID:
BCK80260
UniProt:
A0A810PX71
LinkDB
All DBs
Position
complement(25567..27201)
Genome browser
AA seq
544 aa
AA seq
DB search
MSKIIKRGDEARKALESGVNQLADTVKVTLGPKGRNVVLDKKFGTPLITNDGVSIAKEIE
LDDPFENMGAQLVREVSTKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPIVMKKGMS
KAVEAAVTAIRAQSQKVNGTDDIARVGTVSSGDAFIGKLIAEAMEKVSSDGVITIEESKT
AETYSEVVEGMMFDRGYITPYMVTDTEKMEAVIDDAYILITDKKISVISDILPLLEQLVQ
AGKKLFIIAEDVEGEALSTLIVNRLRGTLNVVCVKAPGFGDRRKEMLQDIAILTGGQVIS
EELGLTLKDATVDMLGRARQVKVTKENTIIVDGMGDKQAIADRVAQIRNQIGLTTSEYDK
EKLQERLAKMAGGVAVIKVGAATETEMKEKKLRIEDALNATKAAVEEGIVAGGGTIYVNV
IPAVTALLNEVEGDEKTGVQIVAKALEEPIRQIAANAGLDGSVILEKVRTSGKNGYGFDA
YKEEYCDMIASGIVDPAKVTRSALENAASVSGMVLTTESLVADKPQPPAPAAPAPEMGGM
GGMY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcattaagcgtggcgacgaggcccgcaaggcgctggagtccggcgtcaat
cagctggcggataccgtaaaggtcactctgggtcccaagggccgcaatgtggtgctggat
aagaagttcggcactcccctgatcaccaacgacggcgtatccatcgccaaggagatcgag
ctggacgatccgtttgagaacatgggtgctcagctggtgcgtgaggtttccaccaagacc
aacgatgtggccggcgacggtaccaccaccgccaccctgctggcacaggccatggttcgt
gagggcctgaagaatctggccgccggtgccaaccccatcgtcatgaagaagggtatgtcc
aaggccgtggaggccgccgtaaccgccatccgtgcccagagccagaaggtcaacggcacc
gatgacatcgcccgtgtgggtaccgtctcctccggcgatgccttcatcggcaagctgatc
gccgaggccatggagaaggtctcctccgacggtgtgatcaccatcgaggagtccaagacc
gccgagacctactccgaggtggtggagggcatgatgttcgaccgtggctacatcaccccc
tacatggtcaccgataccgagaagatggaggccgtcatcgacgacgcctacatcctcatc
accgataagaagatctccgtcatctccgacatcctgcccctgctggagcagctggtgcag
gccggcaagaagctgttcatcatcgctgaggatgttgagggcgaggccctgagcaccctg
atcgtgaaccgtctgcgtggcaccctgaacgtggtgtgcgtcaaggcccccggcttcggt
gaccgccgcaaggagatgctgcaggatatcgccatcctcaccggcggtcaggtcatcagc
gaggagctgggtctgaccctgaaggacgccaccgtggatatgctgggccgtgcccgtcag
gtgaaggtcaccaaggagaacaccatcatcgtggacggcatgggcgacaagcaggctatt
gccgaccgtgtggctcagatccgcaaccagatcggcctgaccaccagcgagtacgataag
gagaagctgcaggagcgtctggccaagatggccggcggcgtggccgtcatcaaggtaggc
gctgctaccgagactgagatgaaggagaagaagctccgcatcgaggacgctctgaacgcc
accaaggccgctgtggaagagggcatcgtggctggcggcggcaccatctatgtcaacgtc
atccccgctgtcaccgccctgctgaacgaggtggagggcgatgaaaagaccggcgtgcag
atcgtggccaaggctctggaggagcccatccgccagatcgctgccaatgccggtctggac
ggctccgtcattctggagaaggtccgtacctccggcaagaacggctacggcttcgacgcc
tacaaggaggagtactgcgacatgattgccagcggcatcgtggatcccgccaaggtgacc
cgctccgctctggagaatgccgccagcgtctccggcatggtgctgaccaccgagtctctg
gtggccgacaagccccagcctcccgcacccgctgctcccgctcccgaaatgggcggcatg
ggcggcatgtattaa
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