Vescimonas coprocola: MM50RIKEN_00510
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Entry
MM50RIKEN_00510 CDS
T07634
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vcop
Vescimonas coprocola
Pathway
vcop03410
Base excision repair
vcop03430
Mismatch repair
vcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MM50RIKEN_00510
03430 Mismatch repair
MM50RIKEN_00510
03440 Homologous recombination
MM50RIKEN_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_00510
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MM50RIKEN_00510
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MM50RIKEN_00510
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MM50RIKEN_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BCK80288
UniProt:
A0A810PVM7
LinkDB
All DBs
Position
complement(50393..52495)
Genome browser
AA seq
700 aa
AA seq
DB search
MKFSKWHIAPAEEADIRRLGEAGYPQLVSQVLAARSISTAEEAAAFLERGRDLTCSPFLM
KDMDRAVECISRAIGQGLRMAVFGDYDVDGITATVILVDYLKSRGVDVLHYIPRRIEDGY
GLGQDAIRSLHEQGVELLITVDCGITGVEEVDFAASLGMDVVITDHHECKDTLPRAVAVV
DPHRPDCTYPFPYLAGCGVALKLVLALGGESREEALFSRYCTLAAIGTIADVMPMSGENR
IIVSRGLECITQSDFIGLHALLQEAGLMDKAITSVQVGFVLAPRINAAGRMGAADKAADL
LLCQDPAEAARLARELCALNRERQAVEQTIYAQAVEQIDHLPPQERSALVLASDTWHQGV
VGIVASRLSEKYACPSFMIHLSGTVGKGSCRSWGGFNLFAALERCSDLLLDFGGHELAAG
FTIDVANIPSFRQRMNQLVREYQGGGAPEVCLEIDAALTCPSRVTLTEVEALGMLEPYGA
GNARPLFCLMGATLERLQSVGQNRHLKLRLSKGSSQFDGIFFSVSPDTCPVAAGSRVDAA
FYLQINEFRGNRTVQLQMVDIRPSLTVSTREDECLHLLERCLRGDRLLPKEAVHLLPSRS
QCVQLWRALEHTVPPEGLTACYLPLLRELSARLEGADPFLRTAFCLEVFRERQLLTLRQE
GDTISITLTGQGKHVRLEESGYLQGLHEVMQPKRGGDHHD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttccaaatggcatatcgccccagcggaggaagcggatatccgccgtctcggc
gaggctggctatccccagctggtgtcgcaggtactggcggcacggagcatctccacggcg
gaggaggccgccgcctttctggagcggggccgggatctgacctgctcccccttcctgatg
aaggacatggaccgggcggtggagtgcatcagccgggccatcgggcagggcctccgcatg
gcggtgttcggggattacgacgtggacggcatcaccgccacggtgatcctggtggattac
ctgaaaagccggggcgtcgatgtgctgcactatattcctcgccgcatcgaggacggctac
gggctggggcaggacgccatccgctccctccatgagcagggggtagagctgctcatcacc
gtggactgcggcatcaccggggtggaggaggtggacttcgccgcctctctgggcatggat
gtggtcatcaccgatcaccacgagtgcaaggacaccctgccacgggccgtggcggtggtg
gacccccaccggccggactgcacctatcccttcccctatctggcgggctgcggcgtggcg
ctgaagctggtgctggcgctgggcggcgagagccgggaggaggcccttttctcccgctac
tgcaccttggccgccatcggcaccattgccgacgtgatgcccatgtccggggagaaccgc
atcatcgtctcccgtggcttggagtgcatcacccagtcggacttcatcggcctccacgcc
ctgctgcaggaggcaggcctcatggataaggccatcacctccgtgcaggtgggcttcgtg
ctggccccccgcatcaacgccgccggccgcatgggggcagcggacaaggccgccgacctc
ctgctgtgtcaggacccggcggaggccgcccggttggcccgtgagctgtgcgccctgaac
cgggagcgtcaggcggtggagcagaccatctatgcccaggcagtggaacagatcgaccat
ctgccgccgcaggagcgcagcgctctggtgctggcctccgacacgtggcaccaaggggtg
gtgggcatcgtggcctcccgcctgtcggaaaaatacgcctgtcccagctttatgatccac
ttaagcggcaccgtgggcaagggctcctgccgcagttggggcggcttcaaccttttcgcc
gctctggagcgctgctccgacctcctgctggatttcggcggtcacgagctggcagcgggc
ttcaccatcgatgtcgccaatatcccctccttccgccagcggatgaaccagctggtgcgg
gaatatcagggtggcggagcgccggaggtatgtctggagatcgatgccgccctcacctgt
cccagccgtgtcaccctgacggaggtggaggctctggggatgctggagccctacggcgcc
ggtaatgcccgccctctcttctgcctgatgggcgccacgctggagcggctgcagagcgtg
ggccagaatcgccacctgaagctgcggctcagcaagggcagcagccagttcgacggtatt
ttcttctccgtctcccccgacacctgtcccgttgcggcgggcagccgggtggatgcggcc
ttttatctgcagatcaacgaatttcggggcaaccgcacggtacagctgcaaatggtggac
atccgcccgtccctcactgtcagtacacgggaggatgagtgcctgcacctgttggagcgc
tgtctgcggggcgatcggctcctgcccaaggaggcggtccacctgctgccatcccgcagc
cagtgcgtgcagctgtggcgggcgctggagcacaccgtccccccggaggggctcaccgcc
tgctacctgccgctgctgcgggagctgtccgcccggctggagggggccgaccccttcctt
cggactgccttctgtctggaggtgttccgggaacggcagctgctgaccctccggcaagag
ggcgacaccatttccatcacactcaccggccaggggaaacacgtccgcttggaggaatcc
ggttacttacagggcctgcatgaggtcatgcagcccaaacggggaggcgatcaccatgac
tga
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