Vescimonas coprocola: MM50RIKEN_00920
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Entry
MM50RIKEN_00920 CDS
T07634
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcop03016
]
MM50RIKEN_00920 (truB)
Enzymes [BR:
vcop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MM50RIKEN_00920 (truB)
Transfer RNA biogenesis [BR:
vcop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MM50RIKEN_00920 (truB)
Prokaryotic type
MM50RIKEN_00920 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BCK80329
UniProt:
A0A810PVS0
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All DBs
Position
87406..88275
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AA seq
289 aa
AA seq
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MANGIIIIDKPADWTSMDVCAKLRGILKTKKVGHAGTLDPMATGVLPVFVGQATRGVSFA
ESGDKEYLAVLRLGLVTDTQDTSGQVLHRTEALPDRAALEAVLPRFTGEISQLPPMYSAI
KIGGKKLYELARQGKEVERRPRPVTIHALELVEQTASGDYVLRVRCSKGTYVRTLCHDIG
QALGCGGCMAALRRTMAAGFTLSDAVTLEQVQAEGEALLRPVDSLFRDRPAYVLPTPRAV
ARCRNGNPVSVTEPLPEGEYRVYDPEGDFLCLSRLEGGVLTSIKNFFGA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgggatcatcatcatcgacaagcccgccgattggaccagcatggacgtctgc
gccaagctgcggggaatactgaaaaccaaaaaggtgggccacgccgggacactggatccc
atggccaccggcgtgctgccggtgtttgtgggacaggccacccgtggcgtcagcttcgcc
gaatccggggacaaggagtatctggccgtcctgcggctgggccttgtcaccgatacgcag
gacacctccgggcaggtgctgcaccggacggaggcgctgccggaccgggcggcgctggag
gcggtgctgccacggttcaccggagaaatttcccagctgccgcctatgtactccgccatc
aagatcggcggtaagaagctctatgagctggcccggcaggggaaggaggtggagcgccgt
ccccggcccgtcaccatccacgccctggagctggtggagcagacggcctccggcgactac
gtcctgcgggtgcgatgctccaagggcacctatgtccgtaccctgtgccacgacatcggg
caggcgctgggctgcggcggttgtatggctgccctgcggcgcaccatggcggcgggcttc
accctgtccgacgccgtgacgctggagcaggtgcaggcggagggcgaggccctgctgcgg
ccggtggactccctgttccgggatcgtccggcctatgtgctgcctaccccacgggctgtg
gcccgctgccgcaacggcaatcccgtctccgtgacggagccgctgccggagggggagtac
cgggtctacgacccggagggcgattttctgtgcctgagccgcttggagggcggcgtgctg
acctccattaaaaactttttcggagcgtga
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