Vescimonas coprocola: MM50RIKEN_05020
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Entry
MM50RIKEN_05020 CDS
T07634
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
vcop
Vescimonas coprocola
Pathway
vcop00550
Peptidoglycan biosynthesis
vcop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM50RIKEN_05020 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcop01011
]
MM50RIKEN_05020 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcop01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MM50RIKEN_05020 (spoVD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Arylesterase
DUF6577
Motif
Other DBs
NCBI-ProteinID:
BCK80739
UniProt:
A0A810PX34
LinkDB
All DBs
Position
510645..512888
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AA seq
747 aa
AA seq
DB search
MAENRRKSENIRRANRVIQTRTFVLMLVLGVAVFLVLALKLYQLQIKQHDYYQSKALDQQ
TRSTVVTASRGTIYDRNGNELAVSATAETVFLSPKELAEELEKPETKWTKESLSAGLSQL
LGVTQESILEQMERTYSQYEVVKLRVDEDTANAVREFLNDNEVHGVYLETDAKRYYPYGS
LAAHVIGFVGTDNTGLYGLEAQYEEELQGQTGLVVSAKDNGGNALPYEYEQYYASHNGDD
LVLTLDTNVQYYLEKYVKEMADQFEAANGATGIVMDVKTGGVLGMVSYPNYDLNNYSEVS
DARLKAAIEDGSASLADQQLRQWRNKALNDTYEPGSTFKILTLSAALEEGVVDMSSTFEC
SGSITVMGQTIHCSNTSGHGHQTLKEATGNSCNPAFINCGLGLGTDTFYEYMRSFGLLEG
SGIDLAGEATGIFMAQSDFSQLDLACYAFGQNFNVTPISLIAAQAACINGGYLYQPHVVE
QVRDSSGAVVYQHDNTPLRQVVSQQTSAMARECLEYVVSDGGGRNGQVKGYRIGGKTGTA
DKGKTGDVVVSFVAFAPADDPQIIMLIAMDSPARDTGTYPSGGAMVAPVASKVMAEILPY
LGIEPTYTAEELMGADTTVPYVVGMTREEAQQRVKDRGFGCQIVGDGDTITDQTPAGGAI
IPGNATVILYAGAEKATELCTVPNLLGRTASEANSLASNAGLILRFTGATNSTSGSIVVL
NQDVEAGAQVEPGTVISVQLGDTSLND
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacagaaggaaaagtgaaaacatccggcgggccaaccgggtcatccagacc
cgtacctttgtgctgatgctggtgctgggcgtggcggtgtttctggtgctggccctgaag
ctgtatcagctgcagatcaagcagcacgactactaccagagcaaggcgctggatcagcag
acccgcagcactgtggtgacggcctcacgaggcaccatctacgaccgcaacggcaacgag
ctggcggtatcggccacggcggagacggtgttcctctctcccaaggaactggcggaggag
ctggaaaagcctgagaccaagtggaccaaggagagtctctccgccggcctgagtcagctg
ctgggtgtgacgcaggagagtattctggagcagatggagcgtacctattcccagtacgag
gtggtgaagctccgggtggacgaggacacggccaacgccgtccgggagttcctcaatgac
aacgaggtccacggcgtgtatctggagaccgatgccaagcgctactatccctatggctcg
ctggcggcccacgtcatcggcttcgtgggaacggacaacaccggcctctacgggctggag
gcccagtatgaggaggagctgcagggccagacgggtctggtggtcagcgccaaggacaac
ggcggcaacgccctgccctatgaatacgagcagtactacgcctcccacaacggcgacgat
ctggtgctgacgctggataccaacgtccagtactatctggagaaatacgtcaaggagatg
gcggaccagttcgaggctgccaacggcgccaccggcatcgtcatggacgttaagaccggc
ggcgtgctgggtatggtgtcctaccccaactacgatctgaacaactactccgaggtgtcg
gacgcccgcctgaaggcggccattgaggacggcagcgcctcactggcggatcagcagctg
cgccagtggcgcaacaaggccctcaacgacacctatgagcccggctccaccttcaagatc
ctgacgctgtcggcagcgctggaggagggcgtggtggatatgagctccacctttgaatgc
tccggctccatcaccgtcatgggccagaccatccactgcagcaacaccagcggccacggg
catcagaccctgaaggaggccaccggcaactcctgcaaccccgccttcatcaactgtggc
ctgggactgggaacagataccttctacgagtatatgcgctccttcggcctgctggaaggc
tccggcatcgatctggccggtgaggccaccggcatcttcatggcccagagcgacttttcc
cagctggatctggcctgctatgccttcggccagaactttaacgtgacccccatttcgctc
atcgccgcacaggccgcctgcatcaacggcggctacctgtaccagccccatgtggtggag
caggtccgggacagcagcggcgctgtggtgtatcagcacgacaacacccccctgcgtcag
gtagtcagccagcagacctccgccatggcccgtgagtgcctggagtatgtggtctccgac
ggcggcggccgcaacgggcaggtgaagggctaccgcatcggcggcaagaccggtacggcg
gataagggcaagaccggcgacgtggtggtgtccttcgtggcctttgccccggcggacgat
ccacagatcatcatgctcatcgccatggactcccccgcccgtgacaccggcacctacccc
tccggcggcgccatggtggctccggtggccagcaaggtcatggcggagatcctcccctat
ctgggcatcgagcccacctataccgctgaggagctcatgggtgccgacaccaccgtcccc
tatgtggtgggcatgacccgtgaggaagcccagcagcgggtgaaggaccgtggcttcggc
tgccagatcgtcggtgacggcgataccatcaccgaccagacccctgccggcggggccatc
atccccggcaacgccacggtgatcctctatgccggggcggagaaagccacagagctgtgt
actgtccccaacctgctgggccggacggcgtcggaggccaattcgctggccagcaacgcc
ggactgatcctgcgcttcaccggcgccaccaacagcacctccggcagcatcgtggtgctg
aatcaggatgtggaggccggtgctcaggtggagcccggcaccgtcatcagcgtgcagctg
ggcgataccagcctcaacgactga
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