Vescimonas coprocola: MM50RIKEN_07440
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Entry
MM50RIKEN_07440 CDS
T07634
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_07440 (addB)
Enzymes [BR:
vcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM50RIKEN_07440 (addB)
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MM50RIKEN_07440 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BCK80981
UniProt:
A0A810Q6A7
LinkDB
All DBs
Position
770317..773646
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AA seq
1109 aa
AA seq
DB search
MLSIWIGRAGAGKSRRVLETMARQRSQRPQVLLVPEHISHEAEVDLCRALGPTASRDAEV
LSFQSLGSRVLAQTGGLAEFTLDGGGKLLTMRLALQELHSRLKVFGRPSQRAAFLRQLTD
LTEEFYAYEITPQALWQQVEDMEGAMGDKLRDLALLYAAYDGKLHAEGVDARSRLQKLRD
RLAESDYLRGKDVYLDGFSYLNKLEESVLEQVMRQAESVTVTLLGDRAEGTLFQNALRQR
QRLERMARQLGTECEIVWLTGSGKGPLAHLEKHLLGEDMPYEGDDCRQQVALWECGTVYG
EVERTAAQIRKLVASGACRWRDIAVTARNMEVYGPVIESVFQRDGIPAYISRRSDILAKP
PLTMLLGAVDAVTGGFRREDMFRYLKTGMAGITAEECDLLENYVILWSIRGNMWLRDTEW
TANPDGYGQEMTPERQQRLADVNRIRQKVRSTLLPLSDGLKDRPKARDKAEMLYIFAEES
GVPQRLKETTEELLRQGQAQLAEEYSQLWRILCGVLDQMAEILGEMELSGEEFARLLRLV
LTQYSVGTIPATLDQVKVSELTRNDRHSVKRLFLLGANDHVLPQPPSGHGLLEPEEREIL
QQRDILLSDAAFDPLDNELQNIYACLAQPSEHLTVSYPVTDHNGGQLRPSFVVRRLERLF
PGLMPERETVRLLTPAVALEEAGQEMGGSLWRYFAGREEYAGTLAAMERARQLRRGRLSP
AAVQSLYGTRMGMSASRMDRVRQCHFGYFMQYGLRAKERRPAGFEAPEIGTFLHYLLENT
AREVAGSGGWAAVKTPQLHAMVRKYIDLYIRDEIPGYEEKSARFRYLFGRLRTTAEDIVD
RMAEELAESDFKPVAFELGFGGRDGTLPAITIQEGDATLSVSGKVDRVDGWLHDGKLYLR
VVDYKTGRKSFDLSDVRYGLGIQMLLYLFTLEKEGQSCFGYPIVPAGVLYHPARDLILKT
ERDISPEALRRAMDRELRRDGMVLGDPEVLRAMEHSALEAPCFLPIQVSKDGGISGGVAT
AAQLGRLGQYVEKLLHQITRELRQGNIDADPCWRGPQESACTYCDFASACHFQDGQADDR
LRPLKRVKADEFWEFVAHETGEEGRHGEL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgctttccatatggatcggacgggcgggggccggaaagtcccgccgggtgctggagacc
atggcccggcagcgcagccagaggccgcaggtgctgctggtgccggagcatatctcccat
gaggcggaggtggatctgtgccgggcgttggggcctacggcctcccgtgatgcggaggtg
ctgagcttccagagcctcggcagccgggtgctggcccagaccggcggactggcggagttt
acgctggacggcggcggaaagctgctgaccatgcggctggcgctgcaggagctgcacagc
cggctgaaggtgttcggacggccctcccagcgggcggcgtttctgcggcagctgacggat
ctgacggaggagttctacgcctatgagatcacgccacaggctctgtggcagcaggtggag
gatatggagggcgccatgggcgataagctccgggatctggcgctgctgtatgccgcctat
gacgggaagctccatgccgagggcgtggacgcccggtcccggctccagaagctgcgggac
cggctggcggagagcgactatctccggggcaaggacgtgtatctggacgggttctcctac
ctgaacaagctggaggagagcgtgctggagcaggtgatgcgtcaggcggagagcgtgacg
gtgacgctgctgggcgaccgggcggaggggacgctgtttcagaatgccctgcgtcagcgg
cagcggctggagcggatggcccggcagctggggacggagtgcgagatcgtgtggctcacc
ggctctggaaaggggccgctggcccatctggagaagcacctgctgggggaggatatgccc
tatgagggggacgactgccgacagcaggtggcgctgtgggagtgcggcacggtatacggc
gaggtggaacggacggcggcgcagattcggaagctggtggcctccggggcctgccgctgg
cgggacattgccgttaccgcccggaacatggaggtatacggcccggtcatcgagagcgtt
tttcagcgggatggcatcccggcgtacatcagccgccgcagcgatattctggcaaagccg
cccctgaccatgctgctgggggcggtggatgccgttaccggcggcttccggcgggaggat
atgttccgctatctcaagacggggatggcgggcatcacggcggaggaatgtgacctgctg
gagaactatgtgatcctgtggagcatccggggaaatatgtggctgcgggacacggagtgg
acggcaaaccccgacggctacgggcaggagatgaccccggagcggcagcagcggctggcg
gatgtcaaccgcataaggcagaaggtgcgctctacgctgctgcccctgagcgatggcctg
aaggataggccgaaggccagggataaagcggagatgctttacatatttgccgaggagtcc
ggcgtgccgcagcgcctgaaggagacgacagaggagctgctgcggcagggacaggcccag
ctggcggaggaatacagccagctgtggaggatcctgtgcggcgtactggatcagatggcg
gagatcctgggggagatggagctctccggcgaggaatttgcccggcttctgcggctggtg
ctgacccagtacagcgtgggaaccatcccggcgacgctggatcaggtgaaggtcagcgag
ctgacccgcaacgaccggcactcggtgaagcggctgtttctgctgggggccaacgaccat
gtgctgccccagccgccgtcgggccacggcctgctggagccggaggagcgggagattttg
cagcagcgggacattctgctgtcggatgcggcctttgacccgctggacaacgaattgcag
aacatctatgcctgtctggcccagccgtcggagcatctgacggtgagctatccggtgacg
gatcacaacggcggacagctgcggccctcctttgtggtgcggcggctggagcggttgttt
ccgggcttgatgccggagcgggagacggtgcgtctgctgaccccggcggtggcgctggag
gaggccggtcaggagatgggcggctccctgtggcggtactttgccgggagagaggagtac
gccgggacgctggcggccatggagcgggccagacagctgcgccggggacggctgtccccg
gcggcggtgcagtccctgtacgggacccggatggggatgtccgcctcccggatggatcgg
gtgcggcagtgccacttcggctactttatgcagtacggcctgcgggccaaggagcggcgt
ccggcgggcttcgaggccccggagatcgggacgtttctgcactatctgctggagaacacc
gcccgtgaggtggcaggcagcggcggctgggcggcggtgaaaacgccgcagctacacgct
atggtccgtaaatacattgacctttacatccgggacgagataccgggttacgaggaaaag
agcgcccggttccgctatctgttcgggcggctgcgcaccacggcggaggacatcgtggac
cgcatggcggaggagctggcggaatcggatttcaagcccgtggcctttgagctgggcttc
ggcggacgggacggcacactgccggccatcaccattcaggagggggatgccaccctctcc
gtcagcggaaaagtggaccgggtggacggctggctccacgacgggaagctgtatctgcgg
gtggtggactataagacggggcgcaagtccttcgatctgtcggatgtgcggtacgggctg
gggatccagatgctgctgtatctgttcacgctggagaaggagggacagtcctgcttcgga
taccccattgtcccggcgggggtgctgtaccacccggcacgggatctgatcctgaagacc
gagcgggacatttcaccggaggccctccgcagggccatggatcgggaactgcggcgggac
ggcatggtgctgggagacccggaggtgctgcgggccatggagcacagtgcgctggaggcg
ccgtgcttcctgcccattcaggtgagcaaggacggcggcatcagcggcggcgtggctacg
gcggcgcagctggggcggctggggcagtatgtggagaagctgctgcaccagatcacccgt
gagctgcggcaggggaacatcgatgcagacccctgctggcgggggcctcaggagagcgcc
tgcacctactgcgattttgcctcggcctgtcacttccaggacgggcaggccgacgaccgg
ctgcggccgctgaaacgggtgaaggccgacgagttctgggaatttgtagcgcatgagacg
ggagaggagggacgtcatggggagctttga
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integrated database retrieval system
