Vescimonas coprocola: MM50RIKEN_07890
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Entry
MM50RIKEN_07890 CDS
T07634
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MM50RIKEN_07890 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_07890 (ruvB)
Enzymes [BR:
vcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM50RIKEN_07890 (ruvB)
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MM50RIKEN_07890 (ruvB)
RecFOR pathway proteins
MM50RIKEN_07890 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
Sigma54_activ_2
nSTAND3
AAA_3
TsaE
NB-ARC
AAA_18
AAA_33
RNA_helicase
NTPase_1
AAA_14
NACHT
Resolvase
AAA_11
AAA_28
IstB_IS21
NPHP3_N
AAA_17
Rad17
Parvo_NS1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BCK81026
UniProt:
A0A810Q5R4
LinkDB
All DBs
Position
818680..819720
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AA seq
346 aa
AA seq
DB search
MSIDFGTDIYEEPLVAKTLLPEDNAEVSLRPHTLAEYIGQTKAKENLSVFIEAARRRTEP
LDHVLLHGPPGLGKTTLAGIIAAEMGVNIRITSGPAIEKPGDLAALLTNLSENDILFVDE
IHRLNRSVEEILYPAMEDYAIDIIIGKGPSANSIRLDLPKFTLIGATTRAGQLSAPLRDR
FGVTLRLELYTPEELALIVTRSAGILNVPIQPEGAMEIARRSRGTPRIANRMLRRVRDFA
QVRADGVITKAVADHALQALEIDYLGLDPVDRRMLRAIIENYGGGPVGLETLAATIGEES
VTLEDVYEPYLMQLGFLTRTPRGRCVTRKAYEHLHIAFLGQEQLEI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgatttcggcaccgatatctacgaggagccactggtagccaagacgctgctg
ccggaggacaatgcggaggtgagcctgcgcccccatacactggcggagtacatcggccag
accaaggccaaggagaatctctccgtctttatcgaggccgcccggcggcggacggagccg
ctggatcatgtgctgctccacggccctccgggtctgggcaagaccacgctggcgggcatc
atcgccgccgagatgggagtcaacatccgcatcacctccggcccggccattgaaaagccc
ggtgatctggcggccctgctgacgaatctcagcgaaaacgacattctctttgtggacgag
atccaccggctgaaccgctccgtggaggagattttgtaccccgccatggaggactatgcc
atcgacatcatcatcggcaagggcccttccgccaactccattcggctggatctgcccaag
ttcaccctcatcggcgccaccacacgggccggacagctgtccgctccgctgcgggaccgg
ttcggcgtaacactgcggctggagctctataccccggaagaactggccctgatcgtcacc
cgcagcgccggaatactgaatgtccccattcaaccggagggcgccatggagatcgcacgg
cgctcccgtggaacgccccgtatcgccaaccggatgctgcggcgggtgcgggactttgct
caggtgcgggcggacggtgttattaccaaggccgtagcggatcacgccctgcaggcgctg
gagatcgactatctggggctggatccagtggaccggcggatgctgcgggccatcatcgaa
aactacggcggcggcccggtggggctggaaacgctggccgctaccatcggcgaggagtcc
gtgacgctggaggatgtgtatgagccgtacctcatgcagttgggcttcctgacccggaca
ccccgtggccgctgcgtcacccggaaggcatatgagcacctgcacatagcgtttttagga
caggaacagctggagatataa
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