Vescimonas coprocola: MM50RIKEN_08020
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Entry
MM50RIKEN_08020 CDS
T07634
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_08020 (radA)
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MM50RIKEN_08020 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
Lon_C
ChlI
AAA
AAA_14
AAA_22
AAA_24
GvpD_P-loop
AAA_16
Rad51
RecA
SLFN-g3_helicase
NTPase_1
AAA_5
nSTAND3
ATPase_2
NB-ARC
ABC_tran
AAA_18
DZR
AAA_33
NACHT
HypA
Zn_Ribbon_1
Elong_Iki1
RNA_helicase
divDNAB
CobU
AAA_19
KdpD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BCK81039
UniProt:
A0A810PY29
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Position
829325..830695
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AA seq
456 aa
AA seq
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MKAKTVFFCTECGNETPKWSGRCPACGAWNTIVEQTDKPVKSGRKSVFSTTVKAERITEL
GTSDEIRFLTGMGELDRVLGGGAVKGSLVLVGGAPGIGKSTLMLQICKKLGEFSKVLYVS
GEESTHQLKLRAQRLRVESENLYVLSETCLGNVMECVREEKPDVLIVDSIQTLYNEEMDS
PAGGVGQVKDCTMALMQLAKGQGITVFVIGHVNKEGSIAGPKVLEHMVDCVLYFEGDQHM
TYRILRAAKNRFGATNEIGVFEMMDWGLKEVENPSEMLLSGRPKDAPGTCVTCAMEGARP
VLAEVQALIAPASAANPRRMSNGFDYNRFAMLLAVLEKRGNLKVSQCDAYLNIIGGLTLE
EPAADLSAVVAIASSYLDKPVPSHMAAIGEVGLSGEIRSINHMEQRLSEVQRLGFTQCIV
PEHRVKEMKELPHLELLPVQNVAQALQLLVQGKLMK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaagactgtttttttctgcacggagtgcggcaatgagacgcccaagtggtcg
ggacgctgtcccgcctgtggtgcatggaataccattgtggagcagacggataagccggta
aaaagcggaagaaagtctgttttttccacaactgtaaaggcagaacgcatcacagaactg
ggtacctctgacgagatccgcttcctgacgggtatgggggagctggaccgggttttgggg
ggcggcgccgtcaagggatcactggtcttggtgggcggtgcgccgggtattggcaaatct
acactgatgctccagatctgtaaaaaattgggagagttctccaaggtgctgtacgtttcc
ggcgaggaatccacccaccagctgaagctgcgggcgcagcggctccgggtggagagcgaa
aatctgtatgttttgtcggagacgtgtttagggaatgtcatggaatgtgtccgggaggaa
aaaccggatgtgctcatcgtggactccatccagacactgtataatgaagagatggattct
cccgccggcggcgtggggcaggtgaaggactgtaccatggccctgatgcaactggcaaag
ggacagggcattacggtatttgtcatcggccacgtcaacaaggagggctctatcgcaggt
cccaaggtgttggagcacatggtggactgcgtgctgtatttcgagggcgatcagcacatg
acctaccgcatcctgcgggcagccaagaaccgtttcggcgccaccaacgagatcggcgtc
tttgaaatgatggactggggcctgaaggaggtggagaatccctccgaaatgctgctgtcg
ggccgtcccaaggatgcaccggggacctgcgtcacctgcgctatggagggagcccgcccg
gttttggcggaggtgcaggctctcatcgctccggccagcgccgccaatccccggcgcatg
agcaacggctttgactacaaccgctttgcgatgctgctggcggtgctggagaagcggggg
aatctgaaggtctcccagtgtgatgcatacctgaatatcatcggtggtctaacgctggag
gaaccggcggcagatctgtccgctgtggtggccatcgcctccagctatctggacaagccc
gttcccagccatatggccgccatcggagaggtgggactgtctggggaaatacggtctatc
aatcacatggagcagcgtctatctgaggtgcagcgactgggtttcacgcagtgcatcgtc
ccggagcaccgggtcaaagagatgaaagaactgccgcatctggagcttctgccggtacag
aacgtggcgcaggctctccagctgctggtacagggaaagctgatgaagtga
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