Vescimonas coprocola: MM50RIKEN_08050
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Entry
MM50RIKEN_08050 CDS
T07634
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop03420
Nucleotide excision repair
vcop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MM50RIKEN_08050
03430 Mismatch repair
MM50RIKEN_08050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_08050
Enzymes [BR:
vcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM50RIKEN_08050
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM50RIKEN_08050
MMR (mismatch excision repair)
Other MMR factors
MM50RIKEN_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_14
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BCK81042
UniProt:
A0A810Q481
LinkDB
All DBs
Position
833403..835835
Genome browser
AA seq
810 aa
AA seq
DB search
MNELQQRFIRARRQAIALNYQHLNDKQREAVLSTEGPLLLLAGAGSGKTTVLINRVANLL
RYGRGSDTEEIPMPISDDEVEFLEQYVRHPDPEQKPLADYLCAVEPARPWEVLAITFTNK
AANELKDRLERMLGEESRDVWAATFHSACVRILRRDIDKLGFDRSFTIYDTDDTKRLLKD
ILKELELDEKTFPVREIQTIISRSKDDMILPEEFAAQAEKSQDWRRKRIGKVYALYNQKL
RDANALDFDDIILHTVDLLRTDRETLAYYQRKFRYVLIDEYQDTNHLQYLLASLLAGGHR
NICVVGDDDQSIYRFRGANIENILNFEKQYTGARTIRLEQNYRSTQNILDGANAVIRHNT
GRKGKTLWTENGKGEIITVKTCFNESDEANYVVGQIMMNYRRGVNWKEHAVLYRTNAQSN
AMEYAFKRNGVPYKIIGGMKFFDRAEVKDMLAYLCVINNPTDDLRLRRIINVPSRKIGTA
TVDKAQVIATEEGRPLYEILCHASDYPELKASAVKLLTFTDMMEEMRRHVADLGLVEFYE
YVCDRTGYVRMLQEKDDMESRGRLENVQELASSIMGFLENEPENPTLAGFLDEVALYTDL
DSQADSDNCVTLMTMHSAKGLEFPCVFVVGMEDGLFPGNRAMGDEEEMEEERRLCYVAMT
RAKEKLTLTNTRQRTLYGRTSPAMPSRFLKEIPEENMEWLGKPEPQQAASHWEGEWQRPT
AASQVRTRREEPVRSTTAPSAPSVRARSAAPSAPLMQLRAGDSVRHNAFGDGMVLSVRPM
GGDALVEVAFDKIGTKKLMLKAAGTHLTKL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattacagcagcgctttatccgggcaaggcggcaggccatcgccctgaactat
cagcatctcaacgacaagcagcgggaggcggtgctctccacggaggggccgcttcttctg
ctggccggagccggcagcggcaagaccacggtgcttatcaaccgggtggccaaccttctg
cgctatggccggggcagcgacacggaggagatccccatgcccatctccgacgatgaggtg
gagtttctggagcagtatgtccggcacccggatccggagcagaagcccttggcggattat
ctgtgcgccgtggagcccgcccgcccgtgggaggtactggccatcaccttcaccaacaag
gctgccaatgagctgaaggatcgtctggagcggatgctgggggaggagtcccgtgatgtg
tgggccgccacctttcactccgcctgcgtgcggattctgcggagggacatcgacaagctg
ggctttgaccgcagttttaccatctacgataccgatgacaccaaacggctcctgaaggac
attctcaaggaattggagttggatgaaaagacctttcccgtccgggagatccagaccatc
atctcccgctccaaggatgatatgatcctgccggaggagtttgccgctcaggcagaaaaa
tctcaggattggcggcgtaagcgcatcggtaaagtatacgcgctttacaatcagaaacta
cgggacgccaatgcgctggacttcgacgatatcatcctccacacggtggatctgctgcgg
acggacagggagacgctggcctactaccagcgtaagttccgctacgtcctcatcgacgag
tatcaggacacgaaccatttgcagtatctgctggccagtctgctggcagggggacaccgc
aacatctgcgtggtaggcgacgacgatcagagcatctaccgcttccggggggccaacatc
gagaacatcctgaattttgaaaagcagtataccggcgcccgtaccatccgtctggagcag
aattaccgctctacacagaacattctggacggggccaacgccgtcatccgccacaacacc
ggccgcaagggcaagactctgtggacggagaacggaaaaggggaaatcatcaccgtcaag
acctgcttcaatgagtccgacgaggccaactatgtagtggggcagatcatgatgaactac
cgtcggggcgtcaactggaaggaacacgccgtgctctaccgaaccaacgcccagtccaac
gccatggagtatgcctttaagcgcaacggcgtaccctataagatcatcggcggcatgaag
ttcttcgaccgggccgaggtcaaggatatgctggcctatctgtgcgtcatcaacaacccc
accgatgatctgcggctgcggcgcatcatcaacgtaccctcccgcaagatcggcaccgcc
acggtggataaggcgcaggtgatcgctacggaggaggggaggcccctctatgagatcctc
tgccacgcatccgactatccagaactgaaagcaagcgctgtaaagcttcttacatttaca
gatatgatggaggaaatgcgccgccatgtggccgatctggggctggtggagttctacgaa
tatgtgtgtgaccgcaccggctatgtgcggatgctgcaggaaaaggacgatatggagagc
cggggccggctggagaacgtacaggagttggcctccagcatcatgggctttctggagaac
gagccggagaaccccactctggcgggctttttggacgaggtggctctatatacggatctg
gacagtcaggcggactccgacaactgcgtcaccctcatgaccatgcacagcgccaagggg
ctggagtttccatgcgtgttcgtggtgggcatggaggacggcctgttccccggcaaccgg
gccatgggggatgaggaggagatggaggaggagcggcgactgtgctacgtggccatgacc
cgtgccaaggagaagctgaccctcaccaatacccggcagcgcaccctgtacggccgtacc
agccccgctatgccctcccgctttctcaaggagatcccggaggagaatatggagtggctg
gggaagcccgaaccccagcaggcggcgtcccactgggagggggagtggcagcgtcctacc
gctgcgtctcaggtacgtacccgtcgggaggagccggtccgatctacaacggctccgtcc
gctccgtcggtgcgggctcgctccgcagcaccctctgcgcccctgatgcagctgcgggcc
ggcgacagcgttcgccacaatgccttcggagacggtatggtgctcagcgtccggcccatg
ggcggcgatgcgctggtggaagtggcctttgacaagatcggcaccaaaaaactgatgctc
aaggccgccgggacccatctgaccaagctgtga
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