Vescimonas coprocola: MM50RIKEN_08710
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Entry
MM50RIKEN_08710 CDS
T07634
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop00900
Terpenoid backbone biosynthesis
vcop01100
Metabolic pathways
vcop01110
Biosynthesis of secondary metabolites
vcop03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MM50RIKEN_08710
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MM50RIKEN_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vcop03011
]
MM50RIKEN_08710
Enzymes [BR:
vcop01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
MM50RIKEN_08710
Ribosome [BR:
vcop03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MM50RIKEN_08710
Bacteria
MM50RIKEN_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
DUF2110
PCB_OB
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
BCK81108
UniProt:
A0A810PYB8
LinkDB
All DBs
Position
complement(894321..896264)
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AA seq
647 aa
AA seq
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MAEVRVAKSAGFCYGVERAVKLAEETAREKGGCAMLGSIIHNVHVVAELEALGARQVDSV
EEVRPGETVIIRSHGERKEVFDRLEQLGSVCVNATCPNVLRIQQLVAQADREGRIPLIIG
EPRHPEVMGVASWSDRSVIFPGPEELEKWLLQEPSRQSLSLTAVAQTTCIRTIWETSKEI
LKKLCTNAKIFDTICSATHRRQLEAAELAAQADVMVVVGDRKSANTKHLAEICRKACPVV
YQIEQAGELTTGFLSGCTMAGLTAGASTPAGIIKEVYTTMSEEIKNMEPQEESFEELLDK
SFKTLNTGEKVTGIVTAVGPTEVQVDLGCKQAGYISAEELSADSSVKPEDVVKVGDEIET
YIIRVNDVEGYAMLSKKRLDAVKVWEDIAEACENKTTLEGKVTEENKGGIVVNVKGVRVF
VPASQSGQPRGADLSQMIGQTVSLRITEVNRARRRVVGSIRAVQYEERQAAQAAIWESIE
VGKHYTGTVKSMTSYGVFVDIGGVDGMVHISELSWSRIKNPAEVVSVGDTLDVYVISFDP
EKHKISLGVKDRSCNPWDKFMETYKVGDVASVRIVKLMTFGAFAEVVPGVDGLIHISQIA
DRRIEKPGDVLSEGQIVDAKITAVDEEKQKISLSIRALLNDGDEDAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggtaagagtagctaaaagcgccggtttctgttacggcgtggagcgggctgtg
aagctggcggaggagacagcccgtgaaaagggcggctgcgccatgctgggcagcatcatc
cacaacgtccatgtggtggcggagctggaggcgctgggggccagacaggtggactccgtg
gaggaggtccgccccggcgagacggtgatcatccgctcccacggggagcgcaaggaggtc
tttgaccgtctggagcaactgggatcggtgtgtgtcaacgccacctgtcctaacgtactg
cggatccagcagctggtggcgcaggccgaccgggaggggcgtatcccccttatcattggg
gagcctcggcatccggaggtcatgggtgtggccagctggtcggatcgcagcgtcatcttt
ccggggccggaggagcttgaaaaatggctcctgcaggagccttcccggcagtctctgtcc
ctgacggcggtggctcagaccacctgcatccgaacaatttgggaaacttccaaagaaatt
ttaaaaaaactgtgtacaaacgcaaaaatctttgatacaatatgtagcgctacgcatagg
cgtcagttggaggcagccgaattggcggctcaggctgacgtaatggtcgtggtcggagat
cgtaaaagtgccaacacgaagcatttagcggagatctgccgtaaggcttgccctgtcgtg
tatcagatcgaacaggcgggggagctgacgacgggctttctttccggatgcacaatggcg
gggcttacggccggcgcgtccaccccggcgggcatcattaaggaggtatatacaacaatg
agcgaagaaatcaagaacatggaaccccaggaagagagctttgaggaactgctggacaaa
tcctttaagactttaaatacaggagagaaggtaaccggtatcgtgacggccgtgggtccc
accgaggttcaggtggatctgggctgcaagcaggcaggctatatttccgcggaagagttg
tccgccgattccagcgtgaagcctgaggacgtggtgaaggtgggtgacgagatcgagacc
tacatcatccgtgtcaacgacgtggagggctacgctatgctctccaagaagcgtctggac
gccgtgaaggtctgggaggatatcgctgaggcctgcgagaacaaaaccactcttgagggc
aaggtcaccgaggagaacaagggcggcatcgtcgtcaacgtcaagggtgtgcgtgtgttc
gttcccgcctctcagagcggtcagccccgtggtgctgatctgagccagatgatcggccag
accgtctccctgcggatcaccgaggtcaatcgcgcccgccgccgtgtggtgggttccatc
cgtgccgtgcagtatgaggagcgtcaggctgctcaggccgccatctgggagagcatcgag
gtgggtaagcactataccggcaccgtcaagtccatgaccagctatggcgtgtttgtggac
atcggcggcgtggacggcatggtacatatctccgagctgtcctggtcccgcatcaagaac
cccgctgaggtggtttctgtgggcgacacgctggatgtgtacgtcatctccttcgatcct
gagaagcacaagatctctctgggtgtgaaggaccgttcctgcaatccttgggacaagttc
atggagacctacaaggtgggcgacgtggcttccgtccgtatcgtgaagctgatgaccttc
ggcgctttcgctgaggtcgttcccggtgtggatggcctgatccacatctcccagatcgcc
gatcgccgcatcgagaagcccggtgatgttctgtccgagggccagatcgtggatgccaag
atcaccgctgtggatgaggagaagcaaaagatctccctgtccatccgtgctctgctgaac
gacggggacgaggacgccgagtaa
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