Vescimonas coprocola: MM50RIKEN_11420
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Entry
MM50RIKEN_11420 CDS
T07634
Symbol
selD
Name
(GenBank) selenide, water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop00450
Selenocompound metabolism
vcop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MM50RIKEN_11420 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcop03016
]
MM50RIKEN_11420 (selD)
Enzymes [BR:
vcop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
MM50RIKEN_11420 (selD)
Transfer RNA biogenesis [BR:
vcop03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MM50RIKEN_11420 (selD)
Prokaryotic type
MM50RIKEN_11420 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
BCK81379
UniProt:
A0A810PZ58
LinkDB
All DBs
Position
complement(1177875..1178912)
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AA seq
345 aa
AA seq
DB search
MEENVKLTKLAKCAGCGAKVGAGVLAQLLEGIQVHKDPNLLVGFDKSDDASVYKVSDELA
LVQTLDFFPPIADDPYTFGQIAATNALSDIYAMGGDPKLALNIMCVPEDMPKDTVHQILR
GGYEKVYEAGALITGGHSIFDDEPKYGLSVTGFVHPDRILTNSGAKEGDVLLLTKPIGIG
ILTSAMKADLCSKESTELAMRLMTTLNKNGRDAMVKYRVHACTDVTGFALMGHLLEMAQG
SDLRAEVEVSAVDLIPEALEFARMGVLPAGMYRNRTFAEQWVDAGQTEIAVQDMLYDPQT
SGGLLMAVDPADADALLAELKGTVPSAQRVGVMRRYEGGARIVLH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatgtaaaactgacgaagctggccaagtgcgccggctgcggcgccaaggta
ggcgccggtgtgctggcgcagctgctggagggtatccaggtccacaaggatcccaatctg
ctggtgggctttgataagagcgacgacgcctcggtgtataaggtatcggacgagctggcg
ctggtgcagacgctggactttttcccgcccattgccgacgatccctataccttcggccag
atcgcagccaccaacgccctgtcggatatctacgccatgggcggtgaccccaagctggct
ctgaacatcatgtgtgtgccggaggatatgcccaaggacacggtgcatcagatcctccgg
ggcggctatgagaaggtttatgaggcgggcgccctcatcaccggcggccacagcatcttc
gacgacgagcccaagtacggcctgtccgtcacgggcttcgtccaccccgacaggatcctc
accaacagcggcgccaaggagggggatgtgctgctgctgaccaagcccatcggcatcggc
atcctcacctccgccatgaaggccgatctttgctccaaggagagcacggagttggccatg
cgcctgatgaccaccctgaacaagaatggccgggacgccatggtgaagtaccgggtccat
gcctgcaccgacgtgacaggctttgccctgatgggccacctgctggagatggcgcagggc
agcgacctacgggccgaggtggaggtgtcggcggtggacctgatcccggaggcgctggag
tttgcccgcatgggggtgctcccggcggggatgtaccgcaaccgtacctttgccgagcag
tgggtggatgccggacagacggagatcgccgtacaggatatgctgtatgacccccagacc
tccggcggcctgctgatggccgtggatccggcggacgccgatgcgctgctggcggagctg
aagggtaccgtgccaagcgcccagcgggtgggcgttatgcgccgttatgagggcggcgcc
cgcatcgtgctgcattga
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