KEGG   Vescimonas coprocola: MM50RIKEN_13650
Entry
MM50RIKEN_13650   CDS       T07634                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vcop  Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:vcop00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MM50RIKEN_13650 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcop03019]
    MM50RIKEN_13650 (rnc)
   03009 Ribosome biogenesis [BR:vcop03009]
    MM50RIKEN_13650 (rnc)
   03036 Chromosome and associated proteins [BR:vcop03036]
    MM50RIKEN_13650 (rnc)
Enzymes [BR:vcop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MM50RIKEN_13650 (rnc)
Messenger RNA biogenesis [BR:vcop03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MM50RIKEN_13650 (rnc)
Ribosome biogenesis [BR:vcop03009]
 Eukaryotic type
  90S particles
   RNase
    MM50RIKEN_13650 (rnc)
 Prokaryotic type
  rRNA processing factors
   MM50RIKEN_13650 (rnc)
Chromosome and associated proteins [BR:vcop03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MM50RIKEN_13650 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase NTP_transf_4 DND1_DSRM
Other DBs
NCBI-ProteinID: BCK81602
UniProt: A0A810Q5R7
LinkDB
Position
1401180..1401863
AA seq 227 aa
MRTLEERLGYTFRDRKRLEGALYHSSYANEHRSLGIHSNERLEFLGDAVLGLVTADYLFR
KHPDLPEGDLTRIRAALVCEESLHEVAQSLDLGSYLKLGKGEEAGGGRQRASILADATES
VFAAVYLDGGLEAARALIHRVLLDKERETDVEERRRDYKTELQELVQRRSNQTLQYELVS
ASGPDHAKVFTSRVLLNGQPIGKGQGHSKKEAEQAAAHAGLATLIRG
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcgtactttagaggagcgtctgggctataccttccgggatcggaagcggctggaaggc
gctttatatcacagctcctacgccaatgagcaccgcagcttgggcattcatagcaatgag
cggctggagtttctgggggacgccgtgctgggtctggtgacggcggactatctgttccgc
aagcacccggatctgccggagggggacttgacccgcatccgggccgcactggtctgcgag
gagagtctgcacgaggtggcccagagtctcgacttgggatcctatctgaagctgggcaag
ggcgaggaggccggcggaggccggcagcgggcgtccatactggcggacgccacggagtcc
gtttttgccgccgtgtatctggacggcgggttggaggcggcccgtgcgctcattcaccgg
gtcctgctggataaggagcgggagacggatgtggaggagcgccgccgggactacaagacg
gagctgcaggagctggtgcagcggcgcagcaaccagacgctgcaatatgaattggtctcc
gccagcggtccggaccacgccaaggtattcacttcccgtgtgctgctgaacgggcagccc
atcgggaagggtcagggccacagcaagaaggaggcggagcaggccgccgcccacgccggt
ctggccaccctgatccgggggtga

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